Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq22 87.8 1e-11 >seq22 Length=2852027 Score = 87.8 bits (96), Expect = 1e-11 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 435127 CCTTTTGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATT 435186 |||| ||||| |||||||| | |||||||||||||||||| | ||| ||||||| | Sbjct 1573204 CCTTCGGAATTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTTTGATTGATACAGCAGTC 1573263 Query 435187 AAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTA 435244 || || || || |||||||| || ||| | || |||||| ||| |||||| ||| Sbjct 1573264 AAGACAGCCGAGACTGGTTACATCCAACGTCGTCTCGTCAAGGCGCTCGAAGATGTTA 1573321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740629074414102