Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq21 89.7 5e-13 >seq21 Length=3333843 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 110728 GTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAAGAAAGAATCGTTC 110787 ||| || ||| | |||| ||| ||||| |||||||| ||||| | ||||| || || Sbjct 2204027 GTTGACAATGCCATCGGAGGCTGCGAAGAAGGCGAGGACGTGGGAGATGAAGAAGCGCTC 2204086 Query 110788 CTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 110847 | ||||| || ||||||||||| | || ||||||||| | ||||||||| || | Sbjct 2204087 GTCATCGTTGAGACGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCGATCTCCTCTGC 2204146 Query 110848 CTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCA 110886 ||||| | || | | |||||||||||| ||||| Sbjct 2204147 GGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCA 2204185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094249780640