Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq21 237 2e-57
>seq21
Length=3333843
Score = 237 bits (262), Expect = 2e-57
Identities = 922/1434 (64%), Gaps = 35/1434 (2%)
Strand=Plus/Plus
Query 118143 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 118202
|||||||| |||||||| |||||| || | |||||| |||| |||||||||
Sbjct 606881 TTGACAACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGC 606940
Query 118203 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 118262
|| |||||||| ||||| |||| || || | |||||||| || ||||||||||| |||
Sbjct 606941 TCGAAGCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATG 607000
Query 118263 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAG 118322
|| || ||| || | ||| | || ||| ||||| |||| ||||||| ||
Sbjct 607001 AGCAGCGAGTTGCGTACACCGTGCTCAGCAATCTTCTCCTTCAGAGACGCCCAGTCCCAG 607060
Query 118323 TTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCG 118380
| || | || | | | ||||||||| ||||||||||||| ||||| | || |
Sbjct 607061 AGGTCAG-TAGGTGTGACATT-CCACATATCGTACTGGAGGATACCCTGGGATACGGGAG 607118
Query 118381 ATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGG 118440
|||| || | |||| || ||||| ||| || | ||| | | ||| |
Sbjct 607119 ATCCTTCGTAGGTCTTGTAAGGGCCAAGTTCCTTTGCGATGTCGCATGAGGAAGTGAGAG 607178
Query 118441 CTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAA 118500
| || || || || || || || || | || | ||| || ||||| || || |
Sbjct 607179 CAGCATGGTAGATGGTCTCGAAGATTTGGATGTTGAGCTTCTTAGCTTCGTCTGACTCGA 607238
Query 118501 ACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGC 118560
| | || ||| | || |||| || |||||||| ||||| | || || || |
Sbjct 607239 AAGGAAGGCGGAGTGCGAGGAAGGCATCGGCAAGACCTTGAACACCCATACCGATGGGTC 607298
Query 118561 GATGTCTCATATTAGACTTC--CGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAAC 118618
| || | | || || | || || || || || || || ||||| |
Sbjct 607299 GGTGGCGGAAGTT--GCTGCGGCGTGCCTCTTCGACAGGGTAGTGGTTGACCTCGATGAT 607356
Query 118619 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 118678
| | || | || |||||| |||| ||||| ||| || ||||| | | | |||||
Sbjct 607357 CTTGTTCAAGTTGCGGGTGACGACCTGTGTGACTTCGTGGAGCTTCTTGAAGTCAAACAC 607416
Query 118679 GCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGT 118738
|| | || | | |||| | ||| ||||| | || |||| || || |||| |
Sbjct 607417 GCCGGCCTTGTAGTCGACAAAAGAAGGCAGGGCAAGAGAAGCCAAGTTGCAAACAGCGAC 607476
Query 118739 CTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCC 118798
|||||| | | |||||||| | ||| || ||||||| ||| || || ||||| ||
Sbjct 607477 CTCATCAGGAGCGGTGTACTCCACAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACC 607536
Query 118799 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 118858
| |||||| || || ||| ||| || || |||||||| ||||| | || | ||
Sbjct 607537 GAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATAAAGGGGTTACC 607596
Query 118859 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTT 118918
||||| || || | || || || || | ||| | | || | ||||| ||
Sbjct 607597 AGTCTCGGTCTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGTGCGCGAACAGTCTCG-- 607654
Query 118919 GGCTCGCCCC----TCT--TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCAC 118972
|| ||| ||| | ||||| | ||| || ||||| || ||||||||
Sbjct 607655 ----CGACCCTTGTTCTGCTTTTCGTAGCTCTCGTACAGAGCTTCGAATTCTTCACCGTA 607710
Query 118973 GGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTC 119032
| | || | ||| || || || | ||||| | || | ||| | || || |
Sbjct 607711 GACATCGGCGAGGCCAGGGCACTCGTTCGGGCACATCAGTGTCCAGTTGCCGTTGTCTTG 607770
Query 119033 AACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGC 119092
|| ||||||||||||||||| || ||||| || || |||||||||| ||| ||| |
Sbjct 607771 GACACGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATCGCGAGCGCGGAC 607830
Query 119093 TTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGG 119152
|| || | || || || |||| || | || | | || || |||||||| ||
Sbjct 607831 CTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAAACCAAAGACGTCAGCGTGCCATGG 607890
Query 119153 TTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCT 119206
|| ||||| | |||| | | ||| |||| ||| |||||| ||||| |
Sbjct 607891 CTCTAGGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCACCCTGGTCGACATAGCG 607947
Query 119207 CGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGT-CC 119265
|||||| ||| ||||||| ||||| ||||||| ||| | ||| || || || ||
Sbjct 607948 AGCAGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTAGATGTTCCGTTAGTGCC 608007
Query 119266 CCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCC 119324
|||| || ||| | | | || | | ||| | || | |||||||| || ||
Sbjct 608008 ACCGATGTATGAGCC--AGTAGCACGAATGCGGTGCACGTTGAGGCCAATACCGCCAGCG 608065
Query 119325 CACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCC 119384
||| ||||| ||| || | |||| || |||| || || ||||| ||| ||
Sbjct 608066 GTCTTGGAGATCAACGCACAGGTCTTGAGTGTGTCGTAAATGCCGTCGATACTGTCCTCC 608125
Query 119385 TTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGA 119444
|| | ||||||||||||| ||||||||| || ||||| || |||||||| |
Sbjct 608126 TTCATGTCGATGAGGAAGCATGACGACATTTGCGGTGATGGTGTGCCCGCGTTGAACAAC 608185
Query 119445 GTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTGTCGTAGGTCTCCAAGACGGC 119503
|| || | ||||| |||| ||| ||| ||||| | |||||||||||| | | |
Sbjct 608186 GTCGGCGAGGCGTGTGTGAA-GTACTTTTGAGACATGTAGTCGTAGGTCTCGATGGCTTT 608244
Query 119504 GGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557
||||| || |||||||| || | | || ||||| | ||||| ||| ||
Sbjct 608245 CTCGATGTCATCACCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTGTGG 608298
Score = 93.3 bits (102), Expect = 5e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093
|||||||||||||||||||| || || ||||| ||||| ||||| ||||| ||||||
Sbjct 2203653 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAATGTTAGACCGGGCATCAGACCGCGCTTC 2203712
Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153
|| | |||||| || | || || || ||||||||| ||||| ||| |||||
Sbjct 2203713 TTGAGCCAGAAGATGGAGGCGAAAGAACCGCTGAAGAAGATACCCTCAACAGCGGCGAAT 2203772
Query 130154 GCAAAGAGACG 130164
|||| ||| ||
Sbjct 2203773 GCAACGAGGCG 2203783
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434991278120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |