Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13]
27 sequences; 33,499,641 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq23 140 8e-28
>seq23
Length=2828041
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| || ||||| || ||||||| ||||| |||| | ||| | || |||
Sbjct 925706 AGCACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCT 925647
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||| || |||||||| || || |||||||| || |||||||| |||||||||
Sbjct 925646 TCCAACTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCT 925587
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| || || || ||||| | |||||| || | |||||| |||
Sbjct 925586 TGGATCTTCGACTTGACGTTGTCAATAGTGTCGCTTGATTCCACCTCGAGCGTGATGGTC 925527
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| |||| || || | ||| | ||||||
Sbjct 925526 TTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 925495
Score = 131 bits (144), Expect = 4e-25
Identities = 143/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||||||||| || ||||| || || || | ||||| |||| || || | || ||
Sbjct 925478 AGGACAAGGTGCAGTGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCGTCC 925419
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || ||||||||||| ||||| || || || || || || |||||||||
Sbjct 925418 TCGAGTTGCTTTCCGGCGAAGATAAGGCGTTGCTGATCCGGAGGGATGCCCTCCTTGTCT 925359
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
||||||||| ||| || ||||||||||| || | || || || | ||||| |||
Sbjct 925358 TGGATCTTTGACTTGACGTTGTCGATGGTGTCGGATGACTCAACCTCAAGAGTGATGGTC 925299
Query 225682 TTGCCCGTCA 225691
||||| ||||
Sbjct 925298 TTGCCGGTCA 925289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530787458738
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |