Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001443195.1_202015-11-13] 27 sequences; 33,499,641 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-12 >seq1 Length=3968015 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 29596 GTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTC 29655 ||| ||| | ||||| || || || || || | ||| ||||| | | |||||| || Sbjct 260225 GTTGATCTTGAGTGTAGGGAACTCTCGCGGTTCGCGCTCCAGCTGCACCTTCAGCGCATC 260284 Query 29656 CACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAG 29715 | |||||| | ||| ||||| || || |||| || || ||| || || ||| Sbjct 260285 TATGTGGTCGATGTATACGTGTGCGTCGCCCATTGTATGTGTAAATGTACCGGGCGTTAG 260344 Query 29716 CCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCAC 29775 || || ||||| | ||||| ||||| || | |||| ||||||||| || || || Sbjct 260345 GTCGCACACATGAGCTAGCATGTGAGTGAGAAGCGCGTAGGAGGCGATGTTGAAAGGTAC 260404 Query 29776 CCCGAGCCCCATGTCCCCTGACCTCTGGTAGAG 29808 ||||| ||||| || | || ||||||||||| Sbjct 260405 ACCGAGACCCATATCGCAGGATCTCTGGTAGAG 260437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163066346922