Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq7 89.7 4e-13
>seq7
Length=1637960
Score = 89.7 bits (98), Expect = 4e-13
Identities = 134/185 (72%), Gaps = 8/185 (4%)
Strand=Plus/Minus
Query 19041 TACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTT 19100
||||||||||| | |||||||| || || ||||| |||||||| || || || |||
Sbjct 246021 TACCAGAGATCCTGCGATATGGGTCTCGGTGTACCTTTCAACATCGCCTCCTACGCGCTT 245962
Query 19101 CTTACCTACATAGTAGCGCATGT-TACAGGACTTAAAACC--GGAGATTTAATTCATACA 19157
|| ||| |||| |||| ||||| | | ||| ||| || | | |||| | ||||||
Sbjct 245961 CTCACCCACATGCTAGCTCATGTGTGC--GACCTAACGCCCGGTACATTT-ACACATACA 245905
Query 19158 ATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCT--AGCTC 19215
||||| |||||||| | || | | || |||||||| | || |||||||| ||| |
Sbjct 245904 ATGGGCGATGCACACGTATATATCGACCACATAGATGCGCTCAAGGTGCAGCTGGAGCGC 245845
Query 19216 GATCC 19220
|| ||
Sbjct 245844 GAACC 245840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399503240443020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |