Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq15 129 7e-25
>seq15
Length=714589
Score = 129 bits (142), Expect = 7e-25
Identities = 470/722 (65%), Gaps = 14/722 (2%)
Strand=Plus/Plus
Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248
||||| || || || | |||| | | | | ||| || || | ||| ||||| | | |
Sbjct 178398 TCGAATTCTTCACCGTAGACATCGGCGAGGCCAGGGCACTCGTTCGGGCACATGAGTGTC 178457
Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308
|| | |||| || | || || ||||| ||||| ||||||||||| || || ||
Sbjct 178458 CAGTTGCCGTTGTCTTGGACACGCTTCATGAAGAGGTCAGGAATCCACAGGGCGTAGAAG 178517
Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368
||||| | | | ||||| || || ||||| || || ||||| |||| |
Sbjct 178518 AGATCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAGGAA-GCCAAA 178576
Query 63369 -ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63427
| |||| ||||| || || | ||| ||||| | | || || || ||||| || ||
Sbjct 178577 GACGTCAGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCTGGGCGCTTGTTGCCACC 178636
Query 63428 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGA 63487
||| || | || | ||| ||||| || || || | | ||| ||||| | |||||| ||
Sbjct 178637 CTGGTCGACATAGCGAGCAGTGTTGTTGTATACACGGAGCATGGGAATGAGACCGTTAGA 178696
Query 63488 TATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGA 63545
| | || || || || ||| || ||| | |||||||| | | ||| ||
Sbjct 178697 TGTTCCGTTAGTGCCACCGATGTATGAGCCAGTAGCACGAATGCGGTGCACGTTG--AGG 178754
Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605
|| || || || || | || ||||| || || || || | ||||| || |||||
Sbjct 178755 CCAATACCGCCAGCGGTCTTGGAGATCAACGCACAGGTCTTGAGTGTGTCGTAAATGCCG 178814
Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT--TGGTGACGAGTAG 63663
|| ||||| || || |||||| | || || || |||||| |||||| | || |
Sbjct 178815 TCGATGCTGTCCTCCTTCATGTCGATGAGGAAGCATGACGACATTTGTGGTGATG-GT-G 178872
Query 63664 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTG 63722
| ||||| || || || || || || ||||| || || | |||| ||| | |||| | |
Sbjct 178873 TGCCCGCGTTGAACAACGTCGGCGAGGCGTGTGTGAAGTACTTTTGAGACATGTAG-TCG 178931
Query 63723 TACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCATTAA 63781
|| ||||| || || || || || || | ||||| || || || |||||||| |
Sbjct 178932 TAGGTCTCGATGGCCTTCTCAATGTCATCACCG-TGAATGCCAACAGCAACACGCATGAG 178990
Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841
|||||| || || | || | | ||| |||||| | | || || || |
Sbjct 178991 CATGTGTTGTGGGCGCTCGGCGACCTTGCCGTTTATGCGGAGGAGATATGAACGCTCGAG 179050
Query 63842 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901
|| || |||||||| | | ||| ||||| || ||||| | ||| |||| |||||
Sbjct 179051 TGTCTTGAAACCAAAGAACTGGTAGTTGAAGTCACGGTCGTAGACGATAGCCGAGTTGAG 179110
Query 63902 CT 63903
||
Sbjct 179111 CT 179112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629816371855680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |