Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq15 336 6e-87
>seq15
Length=714589
Score = 336 bits (372), Expect = 6e-87
Identities = 1054/1622 (65%), Gaps = 18/1622 (1%)
Strand=Plus/Minus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| |||||| |||| || ||| ||| || || || | ||||| ||||| ||
Sbjct 178909 TTCACACACGCCTCGCCGACGTTGTTCAACGCGGGCACACCATCACCACAAATGTCGTCA 178850
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | |||||||| || |||||| || || | |||||||| ||||
Sbjct 178849 TGCTTCCTCATCGACATGAAGGAGGACAGCATCGACGGCATTTACGACACACTCAAGACC 178790
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || ||||||| || ||||| ||||| | | || | ||| |||||||
Sbjct 178789 TGTGCGTTGATCTCCAAGACCGCTGGCGGTATTGGCCTCAACG-TGCACCGCATTCGTGC 178731
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | | ||||| | ||||| ||| || || || || |||||||||| |
Sbjct 178730 TACTGG-CTCATACATCGGTGGCACTAACGGAACATCTAACGGTCTCATTCCCATGCTCC 178672
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
|||| | |||| ||||| | || |||||||||||||| |||||| ||| || |
Sbjct 178671 GTGTATACAACAACACTGCTCGCTATGTCGACCAGGGTGGCAACAAGCGCCCAGGTGCCT 178612
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
| || || || |||||||| || || || | |||| || ||||| || || || |
Sbjct 178611 TCGCCATCTACCTCGAGCCATGGCACGCTGACGTCTTTGGCTTCCTTGACCTGCGCAAGA 178552
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || || ||||| | || || || ||||| ||||| || || ||| || ||||||
Sbjct 178551 ACCACGGCAAGGAGGAGGTCCGCGCTCGCGATCTCTTCTACGCCCTGTGGATTCCTGACC 178492
Query 363965 ATTTTATGAAGCGCGTGGAGG-CAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAAT 364021
|| |||||||| || | | || | | || ||| ||||| | ||||| |||| |
Sbjct 178491 TCTTCATGAAGCGTGTCCAAGACA---ACGGCAACTGGACACTCATGTGCCCGAACGAGT 178435
Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081
| || || || ||||||| | ||||| || | | || || ||||| | || ||
Sbjct 178434 GCCCTGGCCTCGCCGATGTCTACGGTGAAGAATTCGAGGCCCTGTACGAGAGCTACGAGA 178375
Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141
| || |||| || |||| ||| |||||| ||||| |||| ||||| | ||
Sbjct 178374 AGCAGAACAAGGGCCGCGAGACTGTTCGCGCACAAAAGCTTTGGTACGCCATTCTTGAGG 178315
Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
|||||| ||||| || | |||| |||| | ||||| || | |||||||||||| ||
Sbjct 178314 CGCAGACCGAGACTGGTAACCCCTTTATGCTTTACAAGGACGCTTGCAACCGCAAGAGCA 178255
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260
||||| || |||| ||||| | || |||| |||| | || || |||||| | || |||
Sbjct 178254 ACCAGAAGAACCTCGGTACCA-TCCGCAGCTCCAACTTGTGCACTGAGATTGTGGAGTAC 178196
Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319
|| ||||| || ||| ||||| || ||| | || || | || || || | |||||
Sbjct 178195 ACTGCTCCTGATGAGGTCGCCGTTTGCAACTTGGCTTCTCTTGCCCTGCCTTCTTTTGTC 178136
Query 364320 -----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374
|| | ||| |||||| | || | || | || || || | || ||
Sbjct 178135 GACTACAAGGCCGGTGTGTTTGACTTCAAGAAGCTCCACGAAGTCACACAAGTTGTCACC 178076
Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434
|||| | ||||| | ||||| || | || || | || || ||
Sbjct 178075 CGCAACTTGAACAAGATCATCGAAGTCAACCACTACCCTGTCGAAGAGGCACGCCGCAGC 178016
Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494
|| | || || || || || ||| | ||||| || || || ||||| | || |
Sbjct 178015 AACTTCCGCCACCGACCCATCGGTATGGGTGTTCAAGGTCTTGCTGATGCCTTCCTCGCA 177956
Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACA 364554
||| | | || || || || ||| || || | | |||||||| ||
Sbjct 177955 CTCCGCCTTCCTTTCGAGTCAGACGAAGCTAAGAAGCTCAACATCCAAATCTTTGAGACC 177896
Query 364555 ATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCT 364614
|| || ||| || | ||| | || || || | ||||| || |||
Sbjct 177895 ATCTACCATGCTGCTCTCACTTCCTCATGCGACATCGCAAAGGAGCTTGGTCCTTACAAG 177836
Query 364615 ACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674
|| || || || || || | || ||||| | |||||| ||| | ||||||||||||
Sbjct 177835 ACCTACGAAGGATCTCCCGTATCCCAGGGTATCCTCCAGTACGATATGTGGAATGTCACG 177776
Query 364675 CCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734
|| ||| || ||| |||||| | || || || |||| ||| |||
Sbjct 177775 CCTACTGACCTCTGGGACTGGGCGTCTCTGAAGGAGAAGATTGCTGAGCACGGTGTGCGC 177716
Query 364735 AACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAAC 364794
||||| || | | || |||||||| || || || ||| ||||||| || || ||||||
Sbjct 177715 AACTCGCTGCTCATTGCACCCATGCCAACTGCCTCCACTTCACAGATTCTGGGCAACAAC 177656
Query 364795 GAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTT 364854
||||||||||| || | || ||| | ||||| ||||| || || | || || ||
Sbjct 177655 GAGTGCTTCGAGCCATACACCTCCAACATCTATTCCCGCCGTGTCCTCGCTGGTGAGTTC 177596
Query 364855 CCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGC 364914
| ||| || || | | ||||||| ||| |||| || |||||| ||| | |
Sbjct 177595 CAGGTTGTCAACCCATGGTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCTGAGAAC 177536
Query 364915 ATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAA 364974
||||||||| ||||||||||| | ||||| | | ||||| | || ||
Sbjct 177535 ATGAAGAACCGTATCATCGCCGATGGAGGTTCGATTGCCAGGATTCCCAACATCCCTGAG 177476
Query 364975 GATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATG 365034
|| ||| | ||||||| ||||| ||||| || || ||||| ||||||| |||
Sbjct 177475 GAGACAAAGACACTTTACAAGACCGTCTGGGAGATCTCGCAGCGAAGAATCATTGAGATG 177416
Query 365035 GCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG 365094
|| || || || ||||||||||| ||| |||||| | ||| | ||||| ||
Sbjct 177415 GCCGCTGACCGTGGTGCTTTTATTGACCAGTCTCAGTCGCTGAACATCCACATGAAGGAG 177356
Query 365095 CCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACA 365154
|| || | |||| | || || ||||| || || ||||| | ||||| |||||
Sbjct 177355 CCTACTATGGGCAAGATCACTTCTATGCACTTTGCTGGCTGGAAGGCTGGTCTCAAGACT 177296
Query 365155 GG 365156
||
Sbjct 177295 GG 177294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350994921992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |