Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq15 260 2e-64
seq4 93.3 5e-14
>seq15
Length=714589
Score = 260 bits (288), Expect = 2e-64
Identities = 922/1428 (65%), Gaps = 23/1428 (2%)
Strand=Plus/Plus
Query 113903 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGC 113962
|||||||| |||||||| |||||| || | |||||| |||| |||||||||
Sbjct 177585 TTGACAACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGC 177644
Query 113963 TCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATG 114022
|| |||||||| ||||| |||| || || | |||||||| || ||||||||||| |||
Sbjct 177645 TCGAAGCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATG 177704
Query 114023 AGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAG 114082
|| || ||| || | ||| | || ||| ||||| || | ||||||| ||
Sbjct 177705 AGCAGCGAGTTGCGCACACCGTGCTCAGCAATCTTCTCCTTCAGAGACGCCCAGTCCCAG 177764
Query 114083 TTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGAT 114142
| | | | | | ||||||||| ||||||||||||| ||||| | || |||
Sbjct 177765 AGGTCAGTAGGCGTGACATTCCACATATCGTACTGGAGGATACCCTGGGATACGGGAGAT 177824
Query 114143 CCCTCAAATGTCTCGTATGGGCCCTCAACCTCC---GCCAATTCGGAGCTCGCCTCGAGG 114199
|| || | |||| ||| || || || |||| || | ||| | | |||
Sbjct 177825 CCTTCGTAGGTCTTGTAAGGACC---AAGCTCCTTTGCGATGTCGCATGAGGAAGTGAGA 177881
Query 114200 GCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCA 114259
|| || || || || |||||||| || | || | ||| || ||||| || ||
Sbjct 177882 GCAGCATGGTAGATGGTCTCAAAGATTTGGATGTTGAGCTTCTTAGCTTCGTCTGACTCG 177941
Query 114260 AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 114319
|| | || ||| | || |||| || |||||||| ||||| | || || ||
Sbjct 177942 AAAGGAAGGCGGAGTGCGAGGAAGGCATCAGCAAGACCTTGAACACCCATACCGATGGGT 178001
Query 114320 CGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACC 114379
|| || | | || || || || || || || || ||||| | |
Sbjct 178002 CGGTGGCGGAAGTTGCTGCGGCGTGCCTCTTCGACAGGGTAGTGGTTGACTTCGATGATC 178061
Query 114380 CTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACT 114438
| || | || ||||||||| | ||||| ||| || ||||| | | | ||||| ||
Sbjct 178062 TTGTTCAAGTTGCGGGTGACAACTTGTGTGACTTCGTGGAGCTTCTTGAAGTCAAACACA 178121
Query 114439 GCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGT 114498
|| | || | | |||| | ||| ||||| | || |||| || || || | |
Sbjct 178122 CCG-GCCTTGTAGTCGACAAAAGAAGGCAGGGCAAGAGAAGCCAAGTTGCAAACGGCGAC 178180
Query 114499 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558
|||||| | |||||||||| | ||| || || ||||| || || || ||||| ||
Sbjct 178181 CTCATCAGGAGCAGTGTACTCCACAATCTCAGTGCACAAGTTGGAGCTGCGGATGGTACC 178240
Query 114559 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 114618
| |||||| || || ||| ||| || || |||||||||||||| | || | ||
Sbjct 178241 GAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCGTCCTTGTAAAGCATAAAGGGGTTACC 178300
Query 114619 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTGGCACAGTGGCGTT 114678
||||| || || | || ||||| || | ||| | | || | ||||| ||
Sbjct 178301 AGTCTCGGTCTGCGCCTCAAGAATGGCGTACCAAAGCTTTTGTGCGCGAACAGTCTCGCG 178360
Query 114679 GGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC 114738
| | || || |||||| | ||| ||||| || || |||||||| | | ||
Sbjct 178361 GCCCTTGTTCTGCTTCTCGTAGCTCTCGTACAGGGCCTCGAATTCTTCACCGTAGACATC 178420
Query 114739 TGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACG 114798
| ||| || || || | ||||| | ||| | ||| | || || | |||||
Sbjct 178421 GGCGAGGCCAGGGCACTCGTTCGGGCACATGAGTGTCCAGTTGCCGTTGTCTTGGACACG 178480
Query 114799 CTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTC 114858
||||||||||||||| || ||||| || || |||||||||| ||| ||| | || ||
Sbjct 178481 CTTCATGAAGAGGTCAGGAATCCACAGGGCGTAGAAGAGATCGCGAGCGCGGACCTCCTC 178540
Query 114859 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 114918
| || || || |||| || | ||| | | || || |||||||| || || ||
Sbjct 178541 CTTGCCGTGGTTCTTGCGCAGGTCAAGGAAGCCAAAGACGTCAGCGTGCCATGGCTCGAG 178600
Query 114919 GTACACCGCGATTGACCC------CTTACGACGACCAGCCTGGTTTACATACCTCGCTGT 114972
||| | |||| | || ||| | | ||| |||||| ||||| | || ||
Sbjct 178601 GTAGATGGCGAAGGCACCTGGGCGCTT--GTTG-CCACCCTGGTCGACATAGCGAGCAGT 178657
Query 114973 GGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCC-CCGAA 115031
| || |||| || ||||| ||||||| ||| | |||| || || || || ||||
Sbjct 178658 GTTGTTGTATACACGGAGCATGGGAATGAGACCGTTAGATGTTCCGTTAGTGCCACCGAT 178717
Query 115032 -TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTT 115090
|| ||| | | | || | | || | || | |||||||| || || |||
Sbjct 178718 GTATGAGCC--AGTAGCACGAATGCGGTGCACGTTGAGGCCAATACCGCCAGCGGTCTTG 178775
Query 115091 GAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTT 115150
||||| ||| || | |||| || |||| || |||||||| ||| |||| |
Sbjct 178776 GAGATCAACGCACAGGTCTTGAGTGTGTCGTAAATGCCGTCGATGCTGTCCTCCTTCATG 178835
Query 115151 GCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGT 115210
|||| |||||||| |||||||||||| |||||| || |||||||| | || ||
Sbjct 178836 TCGATGAGGAAGCATGACGACATTTGTGGTGATGGTGTGCCCGCGTTGAACAACGTCGGC 178895
Query 115211 GTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAAT 115269
| ||||| |||| ||| ||| ||||| | ||||||||||| | | | |||
Sbjct 178896 GAGGCGTGTGTGAA-GTACTTTTGAGACATGTAGTCGTAGGTCTCGATGGCCTTCTCAAT 178954
Query 115270 GTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317
||| || |||||||| || | | || ||||| | ||||| ||| ||
Sbjct 178955 GTCATCACCGTGAATGCCAACAGCAACACGCATGAGCATGTGTTGTGG 179002
>seq4
Length=2069545
Score = 93.3 bits (102), Expect = 5e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124
|||||||||||||||||||| || || ||||| || || ||||| ||||| ||||||
Sbjct 1053284 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAATGTTAGACCGGGCATCAGACCGCGCTTC 1053343
Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184
|| | |||||| || | || ||||| ||||||||| ||||| ||| |||||
Sbjct 1053344 TTGAGCCAGAAGATGGAGGCGAAAGAACCGCTGAAGAAGATACCCTCAACAGCGGCGAAT 1053403
Query 126185 GCAAAGAGACG 126195
|||| ||| ||
Sbjct 1053404 GCAACGAGGCG 1053414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352435160480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |