Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24] 156 sequences; 34,355,870 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 3e-14 >seq1 Length=2771824 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || ||||| |||||||| ||| |||| | | ||||||| || || Sbjct 1871539 TGCAGTGTGGACTCCTTTTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCTTCCAACTGC 1871598 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | |||||||||||| ||||| || |||||||| || || Sbjct 1871599 TTTCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTC 1871658 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || || | || ||||| ||||| ||| || || | || ||||| || || ||| Sbjct 1871659 GACTTGACGTTGTCAATAGTGTCGCTTGATTCCACCTCGAGCGTGATGGTCTTGCCAGTC 1871718 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 || || || || || ||||||||| Sbjct 1871719 AGGGTCTTGACGAAGATTTGCATA 1871742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391320508460