Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq15 132 8e-26
>seq15
Length=714589
Score = 132 bits (146), Expect = 8e-26
Identities = 334/499 (67%), Gaps = 13/499 (3%)
Strand=Plus/Plus
Query 203838 TCTTG-TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATG 203896
||||| || || ||||| ||||||| | ||||| | || | | ||||||||||||
Sbjct 177234 TCTTGGTCGACAGTGAATTGAATGGGAGCCGAGGCAGCCATGGTACGGAGATAGTACATG 177293
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| || || || ||| || | |||||| |||| | |||| || |
Sbjct 177294 CCAGTCTTGAGACCAGCCTTCCAGCCAGCAAAGTGCATAGAAGTGATCTTGCCCATAGTA 177353
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
|| || |||||| |||||||| ||||| ||||| || |||| | || || |||
Sbjct 177354 GGCTCCTTCATGTGGATGTTCAGCGACTGAGACTGGTCAATAAAAGCACCACGGTCAGCG 177413
Query 204017 GCCATATTGATAATGGTCTT--CTGCGAAATCTCCCACACCGTCTTG-AACACGTCTCTG 204073
||||| | || || |||| |||||| |||||||| || |||||| || |||| |
Sbjct 177414 GCCATCTCAATGAT--TCTTCGCTGCGAGATCTCCCAGACGGTCTTGTAAAGTGTCT-TT 177470
Query 204074 GTGTGTTGAGGCACATCTTCCCACGTCCTG---ATCGAGCCGTTGTCGGCCATCAGTCTC 204130
|| | | ||| || || | ||||| ||||| || ||||| || | |
Sbjct 177471 GTCTCCTCAGG--GATGTTGGGA-ATCCTGGCAATCGAACCTCCATCGGCGATGATACGG 177527
Query 204131 ATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTG 204190
|| || | | ||| ||||| |||| || || ||| | || ||||||
Sbjct 177528 TTCTTCATGTTCTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGCAACCATGGGTTG 177587
Query 204191 ATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCG 204250
| | ||| || || || | || || | |||| | | |||| |||| |||| |||
Sbjct 177588 ACAACCTGGAACTCACCAGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGCTCG 177647
Query 204251 AACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGC 204310
|| |||||||||||| | |||||| | ||| ||| || |||||||| || | ||||
Sbjct 177648 AAGCACTCGTTGTTGCCCAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATGAGC 177707
Query 204311 AGGGAGTTGCGCACACCGT 204329
|| ||||||||||||||||
Sbjct 177708 AGCGAGTTGCGCACACCGT 177726
Score = 95.1 bits (104), Expect = 2e-14
Identities = 346/529 (65%), Gaps = 12/529 (2%)
Strand=Plus/Plus
Query 205072 GTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACATTTTTTGGGACA 205131
|||||| ||| | || || |||||| || || || || || || | || || ||
Sbjct 178388 GTACAGGGCCTCGAATTCTTCACCGTAGACATCGGCGAGGCCAGGGCACTCGTTCGGGCA 178447
Query 205132 CATCAGAGACCACATCTGATCGTCTTTCACCCTCTCCATAAACAGGTCGCTGATCCACAG 205191
||| || | ||| | | ||||| || | || ||| || ||||| ||||||||
Sbjct 178448 CATGAGTGTCCAGTTGCCGTTGTCTTGGACACGCTTCATGAAGAGGTCAGGAATCCACAG 178507
Query 205192 GCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAG 205251
| |||| || ||||| || || | | | || | || ||||||| || ||| ||
Sbjct 178508 GGCGTAGAAGAGATCGCGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCAAG 178567
Query 205252 CCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCT 205310
||||| | | ||| |||||||| ||||| | | | ||| | || ||||| | ||
Sbjct 178568 G-AAGCCAAAGACGTCAGCGTGCCATGGCTCGAGGTAGATGGCGAAGGCACCTGGGCGCT 178626
Query 205311 TGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCA 205370
|||| ||||||||||| || ||||| | |||| | || || ||||| || | |
Sbjct 178627 TGTTGCCACCCTGGTCGACATAGCGAGCAGTGTTGTTGTATACACGGAGCATGGGAATGA 178686
Query 205371 GACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCA--CGTTGGA 205428
||||||| | || ||||| |||| |||| ||||| ||| | | || || |
Sbjct 178687 GACCGTTAGATGTTCCGTTAGTGCCACCGATGTATGAGCCAGTAGCACGAATGCGGTGCA 178746
Query 205429 GATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA-CTCTTGCAGAGTGC 205487
| | |||||| ||||||| ||||| |||| || || ||||| || |||
Sbjct 178747 CGTTG--AGGCCAATACCGCCAGCGGTCTTGGAGATCAACGCACAGGTCTTG-AGTGTGT 178803
Query 205488 TGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-ACCAGATAGCACGAAGCCAGCT-T 205545
||| ||||| ||||| || ||| || |||| | || |||| || | || | |
Sbjct 178804 CGTAAATGCCGTCGATGCTGTCCTCCTTCA-TGTCGATGAGGAAGCATGACGACATTTGT 178862
Query 205546 GGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAG 205594
|| | | | |||||||||| ||| | ||| || |||||| |||||
Sbjct 178863 GGTGATGGT-GTGCCCGCGTTGAACAACGTCGGCGAGGCGTGTGTGAAG 178910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795153649447360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |