Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq15 253 3e-62
seq4 125 9e-24
>seq15
Length=714589
Score = 253 bits (280), Expect = 3e-62
Identities = 1116/1743 (64%), Gaps = 39/1743 (2%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
|||||| ||||| ||||||| || || | || || || || || || ||||| |
Sbjct 179003 CCCACAACACATGCTCATGCGTGTTGCTGTTGGCATTCACGGTGATGACATTGAGAAGGC 178944
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729
| ||||| |||||| | ||||| | ||| |||| ||||| | || || | |
Sbjct 178943 CATCGAGACCTACGACTACATGTCTCAAAAGTAC-TTCACACACGCCTCGCCGACGTTGT 178885
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
||||||| || |||||| ||| |||||||| || ||||| || | | |||||||
Sbjct 178884 TCAACGCGGGCACACCATCACCACAAATGTCGTCATGCTTCCTCATCGACATGAAGGAGG 178825
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849
| ||| | |||||||||| ||| |||| ||||| ||||| ||| ||||
Sbjct 178824 ACAGCATCGACGGCATTTACGACACACTCAAGACCTGTGCGTTGATCTCCAAGACCGCTG 178765
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907
| ||||| || | || | || | | || | | ||| || | | || ||
Sbjct 178764 GCGGTATTGGCCTCAACGTGCACCGCATTCGTGCTACT--GGCTCATACATCGGTGGCAC 178707
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| || ||| | ||| | ||||| ||||| || |||| ||| ||| || |||||
Sbjct 178706 TAACGGAACATCTAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACTGCTCGCTA 178647
Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021
||| |||| | ||| ||| | ||| || |||| |||| || ||||||||
Sbjct 178646 TGTCGACCAGGGTGGCAACAAGCGCCC--AGGTGCCT-TCGCCATCTACCTCGAGCCATG 178590
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CG 112079
|||||| || || | | |||||||| |||| ||||| || | ||||||| ||
Sbjct 178589 GCACGCTGACGTCTTTGGCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG 178530
Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139
|| | ||||||||||||| ||| || |||||||| || |||||||||||| | || |
Sbjct 178529 CGCT--CGCGATCTCTTCTACGCCCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCCAA 178472
Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199
|| | ||||| ||| | ||| | || || || || || || ||| |||||| |
Sbjct 178471 GACAACGGCAACTGGACACTCATGTGCCCGAACGAGTGCCCTGGCCTCGCCGATGTCTAC 178412
Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGA-AAGTCGGGCGACTGCGAC 112258
||||| || || || ||||| ||| | |||||| | | || |||| | | |||
Sbjct 178411 GGTGAAGAATTCGAGGCCCTGTACGAGAGCTACGAGAAGCAGAACAAGGGCCGC-GAGAC 178353
Query 112259 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 112318
|| | || | | ||| | || ||||| || | || ||||||||||||| ||
Sbjct 178352 TGTTCGCGCACAAAAGCTTTGGTACGCCATTCTTGAGGCGCAGACCGAGACTGGTAACCC 178293
Query 112319 ATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 112378
| |||||||||||| ||||| || |||| ||||| || || ||||| | ||| ||
Sbjct 178292 CTTTATGCTTTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCAT 178233
Query 112379 CAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 112438
| || |||||| | || || || || |||| | || | |||||| || ||
Sbjct 178232 CCGCAGCTCCAACTTGTGCACTGAGATTGTGGAGTACACTGCTCCTGATGAGGTCGCCGT 178173
Query 112439 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTG 112497
|| ||| | || || | || || || | ||| || | || || | ||||
Sbjct 178172 TTGCAACTTGGCTTCTCTTGCCCTGCCTTCTTTTGTCGACTACA-AGGCCGGTGTGTTTG 178114
Query 112498 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTG 112557
| | | || ||||||||||| || || |||||| ||| | |||| | || |
Sbjct 178113 ACTTCAAGAAGCTCCACGAAGTCACACAAGTTGTCACCCGCAACTTGAACAAGATCATCG 178054
Query 112558 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617
| || ||||| || || || || || | | ||||| || || |
Sbjct 178053 AAGTCAACCACTACCCTGTCGAAGAGGCACGCCGCAGCAACTTCCGCCACCGACCCATCG 177994
Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 112677
|| | ||||| |||||||| || |||| ||| | |||| | || || || |
Sbjct 177993 GTATGGGTGTTCAAGGTCTTGCTGATGCCTTCCTCGCACTCCGCCTTCCTTTCGAGTCAG 177934
Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG 112737
||||||| ||| | |||| | || |||||||| || || || || |||||
Sbjct 177933 ACGAAGCTAAGAAGCTCAACATCCAAATCTTTGAGACCATCTACCATGCTGCTCTCACTT 177874
Query 112738 CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797
| | || | ||| ||| |||||| || | |||| || || ||||| | |
Sbjct 177873 CCTCATGCGACATCGCAAAGGAGCTTGGTCCTTACAAGACCTACGAAGGATCTCCCGTAT 177814
Query 112798 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTG 112855
| || || | || || | ||||||| |||| || | || | || | || |||||
Sbjct 177813 CCCAGGGTATCCTCCAGTACGATATGT-GGAATGTCACGCCTA-CTGACCTCTGGGACTG 177756
Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915
|| |||| ||||| || ||| | ||| | || ||| || | || |||||
Sbjct 177755 GGCGTCTCTGAAGGAGAAGATTGCTGAGCACGGTGTGCGCAACTCGCTGCTCATTGCACC 177696
Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975
|||||||| |||||||| |||| || |||| || || || ||||| || || |||||
Sbjct 177695 CATGCCAACTGCCTCCACTTCACAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACAC 177636
Query 112976 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT-- 113033
| ||||||||| | | |||||| || ||||| | |||||||| |||
Sbjct 177635 CTCCAACATCTATTCCCGCCGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAAC--CCATGG 177578
Query 113034 CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTG 113093
| | | ||||| || || ||||| ||||| || | |||||| | | || |
Sbjct 177577 TTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCTGAGAACATGAAGAACCGTATCATC 177518
Query 113094 AAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTAC 113153
| || ||||| ||| | ||| | || || || || | |||| | |||
Sbjct 177517 GCCGATGGAGGTTCGATTGCCAGGATTCCCAACATCCCTGAGGAGACAAAGACACTTTAC 177458
Query 113154 CGCACAGTTTGGGAAATCAAG--ATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTC 113211
|| || ||||| ||| | |||| | ||||||| |||||||| || ||||||
Sbjct 177457 AAGACCGTCTGGGAGATCTCGCAGCGAAGAA--TCATTGAGATGGCCGCTGACCGTGGTG 177400
Query 113212 GCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAA 113269
|| ||||| | |||| ||| |||| | |||| | || || ||| |||
Sbjct 177399 CTTTTATTGACC--AGTCTCAGTCGCTGAACATCCACATGAAGGAGCCTACTATGGGCAA 177342
Query 113270 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 113329
| || ||||||||||| | | |||||| |||||||| || || ||||| || ||
Sbjct 177341 GATCACTTCTATGCACTTTGCTGGCTGGAAGGCTGGTCTCAAGACTGGCATGTACTATCT 177282
Query 113330 CCG 113332
|||
Sbjct 177281 CCG 177279
>seq4
Length=2069545
Score = 125 bits (138), Expect = 9e-24
Identities = 292/438 (67%), Gaps = 2/438 (0%)
Strand=Plus/Minus
Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 102242
|| ||| | ||||| || ||||||||||||||||||| ||||| ||| | | ||
Sbjct 1053414 CGCCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATC 1053355
Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 102302
| |||||||||||||| ||||| ||||| ||||| |||||||||||||| |||||
Sbjct 1053354 TTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCC 1053295
Query 102303 CGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTAAA 102362
||||||||||| | ||| || || || || ||| | | | ||
Sbjct 1053294 CGTGACGAGGGCATGCACACCGACTTCGCCTGCCTTCTCTTCTCTCTCCTCGAGAACAAG 1053235
Query 102363 CCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGGGATTC 102422
|| | | ||| || | |||| | | |||||||| ||||||||| ||| |||
Sbjct 1053234 CCCAGCCCAGAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTC 1053175
Query 102423 ATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAATAT 102482
| || || || ||||||||||| |||| ||||| || |||| | ||||
Sbjct 1053174 TTGAGCGACGCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATAC 1053115
Query 102483 ATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA-ATTTGGAACTC 102541
|| |||| || |||| | || || | || || | || | | | || |
Sbjct 1053114 ATCGAGTTCGTCGCTGACCGTCTGCTGTTGGCCCTC-GGCAACGTCAAGGTCTACCACGC 1053056
Query 102542 CAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGA 102601
|| || || || |||||||||||||||||| || | || ||||| |||||||||||
Sbjct 1053055 CACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGA 1052996
Query 102602 AAAGAGGGTTGGGGACTA 102619
||| | || || |||||
Sbjct 1052995 GAAGCGCGTCGGCGACTA 1052978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741189552320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |