Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq7 87.8 1e-12
>seq7
Length=1637960
Score = 87.8 bits (96), Expect = 1e-12
Identities = 161/235 (69%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 30150 CATGTCCGT-GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208
||||||| | |||||| || || ||||||| ||||||||| ||||| || || ||||| |
Sbjct 246243 CATGTCCCTTGTACTCGGCGCCAAAATGCCGCCACTGGAAGCCGTATACTGGACCCAGCT 246302
Query 30209 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268
| || || || ||| | | |||| |||||| | | || | |||||| |||
Sbjct 246303 CGCCTTCCTCGTAGTGGTTTAGGCCCACCTTGTCGAGGTACTCCCGACTGCCGTTGCCGT 246362
Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30328
|||||||||| | || || ||||| ||| || |||| ||| ||| ||||
Sbjct 246363 CCCAGATCTTGATACCAGCGTCCGAGAGAGACTTGCTGTGTGTGCTGCCTGCGACAAACC 246422
Query 30329 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383
| |||| ||| | | ||||| ||| || || || || |||||||||||
Sbjct 246423 ATAGCAACTCGCCAATTACGGCACGAGTAAATACTCTTTTTGTTGTGAGGAGGGG 246477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408616823115788
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |