Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 1e-12
>seq1
Length=2771824
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| | | ||| | || | ||| ||||||||||| || || || ||||| ||||
Sbjct 1872024 CCTCCACGAAGACGGAGGACGAGATGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 1872083
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| || | ||||| || || || ||||| ||||| || || || |||
Sbjct 1872084 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGA 1872143
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
||||| || || || || || || || ||| | || | ||||||||| | || ||
Sbjct 1872144 ATGCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGTCGATAGTGTCAGAAGACTCAACC 1872203
Query 101423 TCAAGAGTGACCGTTTTGCCGGT 101445
|| || |||| || || |||||
Sbjct 1872204 TCGAGGGTGATGGTCTTTCCGGT 1872226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396277646575692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |