Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
>seq1
Length=2771824
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || |||||||| ||| | || || || |||||||| | ||| ||| || ||
Sbjct 1871513 ATGCAGATCTTTGTCAAGACTCTTACCGGAAAGACCATTACATTGGAAGTCGAGTCTAGC 1871454
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | ||||| ||||| || || || || | || || |||
Sbjct 1871453 GACACGATCGACAATGTAAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 1871394
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || |||| || ||||| |||||||| |||| | ||| | | |||||||||
Sbjct 1871393 CAGCGTCTCATTTTCGCTGGTAAGCAGCTGGAAGACGGCCGAACGCTCTCAGACTACAAC 1871334
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || ||||||||||| | ||| |||||
Sbjct 1871333 ATCCAGAAGGAGTCTACTCTCCACTTGGTG 1871304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876041635484
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |