Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24] 156 sequences; 34,355,870 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 5e-13 >seq4 Length=2069545 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 110728 GTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAAGAAAGAATCGTTC 110787 ||| || ||| | |||| ||| ||||| |||||||| ||||| | ||||| || || Sbjct 1053658 GTTGACAATGCCATCGGAGGCTGCGAAGAAGGCGAGGACGTGGGAGATGAAGAAGCGCTC 1053717 Query 110788 CTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 110847 | ||||| || ||||||||||| | || ||||||||| | ||||||||| || | Sbjct 1053718 GTCATCGTTGAGACGCTTGTTCCAGTCGTGAAGGTCCTTGGAGAGGTCGATCTCCTCTGC 1053777 Query 110848 CTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCA 110886 ||||| | || | | |||||||||||| ||||| Sbjct 1053778 GGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATCTGCCA 1053816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093532065920