Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24] 156 sequences; 34,355,870 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 9e-12 >seq4 Length=2069545 Score = 86.0 bits (94), Expect = 9e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675 |||||||||||| || | |||||| || | || | ||||| || ||||| || Sbjct 1053262 GCAGGCGAAGTCGGTGTGCATGCCCTCGTCACGGGAGATGAGCTCGTTGGAGAATGTTAG 1053321 Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735 || ||||| ||||| ||||| |||||||| || |||| || ||||| || ||||| Sbjct 1053322 ACCGGGCATCAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAACCGCTGAAGAA 1053381 Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAG 39765 ||| || || || || || |||||||| || Sbjct 1053382 GATACCCTCAACAGCGGCGAATGCAACGAG 1053411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907460527840