Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq15 297 2e-75
seq4 116 4e-21
>seq15
Length=714589
Score = 297 bits (328), Expect = 2e-75
Identities = 1127/1744 (65%), Gaps = 41/1744 (2%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
|||||| ||||| ||||||| || || | || ||||| || || |||||||| |
Sbjct 179003 CCCACAACACATGCTCATGCGTGTTGCTGTTGGCATTCACGGTGATGACATTGAGAAGGC 178944
Query 104281 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 104339
| | ||||| |||||| | ||||| ||| ||| |||| ||||| | || || | |
Sbjct 178943 CATCGAGACCTACGACTACATGTCTCAAAAGTAC-TTCACACACGCCTCGCCGACGTTGT 178885
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| || || |||||| ||| |||||||| |||||||| |||| || |||||||
Sbjct 178884 TCAACGCGGGCACACCATCACCACAAATGTCGTCATGCTTCCTCATCGACATGAAGGAGG 178825
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| ||| |||| || || | || || | | |||||| ||||| ||| ||||
Sbjct 178824 ACAGCATCGACGGCATTTACGACACACTCAAGACCTGTGCGTTGATCTCCAAGACCGCTG 178765
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517
| |||||||| | || | || | | || | | ||| || |||| || ||
Sbjct 178764 GCGGTATTGGCCTCAACGTGCACCGCATTCGTGCTACTGG--CTCATACATCGGTGGCAC 178707
Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577
|| || ||| | ||| | ||||| ||||| || |||| ||| ||| || |||||
Sbjct 178706 TAACGGAACATCTAACGGTCTCATTCCCATGCTCCGTGTATACAACAACACTGCTCGCTA 178647
Query 104578 TGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631
||| | || | ||| ||| | | || | |||| |||| || ||||||||
Sbjct 178646 TGTCGACCAGGGTGGCAACAAGCGCCCA---GGTGCCTTCGCCATCTACCTCGAGCCATG 178590
Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CG 104689
|||||| || || | | |||||||| |||| ||||| || | ||||||| ||
Sbjct 178589 GCACGCTGACGTCTTTGGCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG 178530
Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749
|| | ||||||||||||| ||| || |||||||| || |||||||||||| | || |
Sbjct 178529 CGCT--CGCGATCTCTTCTACGCCCTGTGGATTCCTGACCTCTTCATGAAGCGTGTCCAA 178472
Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809
|| | ||||| ||| | ||| | || || || || ||||| ||| |||||| |
Sbjct 178471 GACAACGGCAACTGGACACTCATGTGCCCGAACGAGTGCCCTGGCCTCGCCGATGTCTAC 178412
Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC--GGGCGACTGCGA 104867
||||| || || || ||||| ||| | ||||| |||| || | |||| | | ||
Sbjct 178411 GGTGAAGAATTCGAGGCCCTGTACGAGAGCTACGA-GAAGCAGAACAAGGGCCGC-GAGA 178354
Query 104868 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927
| || | || | | ||| | || ||||| || | || ||||||||||||| |
Sbjct 178353 CTGTTCGCGCACAAAAGCTTTGGTACGCCATTCTTGAGGCGCAGACCGAGACTGGTAACC 178294
Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987
| | ||||||||||| ||||| || |||| ||||| || || ||||| | ||| |
Sbjct 178293 CCTTTATGCTTTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCA 178234
Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047
|| || ||||| | || || || || |||| | || | |||||| || |
Sbjct 178233 TCCGCAGCTCCAACTTGTGCACTGAGATTGTGGAGTACACTGCTCCTGATGAGGTCGCCG 178174
Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTT 105106
| || ||| | || || | || || || | ||| || | || || | |||
Sbjct 178173 TTTGCAACTTGGCTTCTCTTGCCCTGCCTTCTTTTGTCGACTACA-AGGCCGGTGTGTTT 178115
Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166
|| | | || ||||||||||| || || ||||||| ||| | |||| | ||
Sbjct 178114 GACTTCAAGAAGCTCCACGAAGTCACACAAGTTGTCACCCGCAACTTGAACAAGATCATC 178055
Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226
|| || ||||| || || || || || | | ||||| || ||
Sbjct 178054 GAAGTCAACCACTACCCTGTCGAAGAGGCACGCCGCAGCAACTTCCGCCACCGACCCATC 177995
Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 105286
||| | |||||||| ||||| || |||| ||| | |||| | || || ||
Sbjct 177994 GGTATGGGTGTTCAAGGTCTTGCTGATGCCTTCCTCGCACTCCGCCTTCCTTTCGAGTCA 177935
Query 105287 GACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAG 105346
|||||||| ||| | |||| | || ||||||||||| || || || |||||
Sbjct 177934 GACGAAGCTAAGAAGCTCAACATCCAAATCTTTGAGACCATCTACCATGCTGCTCTCACT 177875
Query 105347 GCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406
| | || | ||| ||| |||||| || | |||| || || ||||| |
Sbjct 177874 TCCTCATGCGACATCGCAAAGGAGCTTGGTCCTTACAAGACCTACGAAGGATCTCCCGTA 177815
Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACT 105464
|| || || | || || | ||||||| |||| || | || | || | || ||||
Sbjct 177814 TCCCAGGGTATCCTCCAGTACGATATGT-GGAATGTCACGCCTA-CTGACCTCTGGGACT 177757
Query 105465 GGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTC 105524
||| |||| ||||| || ||| | ||| | || ||| || ||||| || |
Sbjct 177756 GGGCGTCTCTGAAGGAGAAGATTGCTGAGCACGGTGTGCGCAACTCGCTGCTCATTGCAC 177697
Query 105525 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 105584
| |||||||| |||||||| |||| || |||| || || || ||||| || || ||||
Sbjct 177696 CCATGCCAACTGCCTCCACTTCACAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACA 177637
Query 105585 CGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT- 105643
| | ||||||||| | | |||||| || ||||| | |||||||| |||
Sbjct 177636 CCTCCAACATCTATTCCCGCCGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAAC--CCATG 177579
Query 105644 -CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 105702
| | | ||||| || || ||||| ||||| || | |||||| | | || |
Sbjct 177578 GTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCTGAGAACATGAAGAACCGTATCAT 177519
Query 105703 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTA 105762
| || ||||| ||| | ||| | || || | || | |||| | ||
Sbjct 177518 CGCCGATGGAGGTTCGATTGCCAGGATTCCCAACATCCCTGAGGAGACAAAGACACTTTA 177459
Query 105763 CCGCACAGTTTGGGAAATCAAG--ATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 105820
| || || ||||| ||| | |||| | ||||||| |||||||| || ||||||
Sbjct 177458 CAAGACCGTCTGGGAGATCTCGCAGCGAAGAA--TCATTGAGATGGCCGCTGACCGTGGT 177401
Query 105821 CGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCCA 105878
|| ||||| | |||| ||| |||| || |||| | || || ||| ||
Sbjct 177400 GCTTTTATTGACC--AGTCTCAGTCGCTGAACATCCACATGAAGGAGCCTACTATGGGCA 177343
Query 105879 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 105938
|| || ||||||||||| | | |||||| |||||||| || || ||||| || |
Sbjct 177342 AGATCACTTCTATGCACTTTGCTGGCTGGAAGGCTGGTCTCAAGACTGGCATGTACTATC 177283
Query 105939 TCCG 105942
||||
Sbjct 177282 TCCG 177279
>seq4
Length=2069545
Score = 116 bits (128), Expect = 4e-21
Identities = 290/438 (66%), Gaps = 2/438 (0%)
Strand=Plus/Minus
Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 94866
|| ||| | ||||| || ||||||||||||||||||| ||||| ||| | | ||
Sbjct 1053414 CGCCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATC 1053355
Query 94867 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 94926
| |||||||||||||| ||||| ||||| ||||| |||||||||||||| |||||
Sbjct 1053354 TTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCC 1053295
Query 94927 CGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTAAA 94986
||||||||||| | ||| || || || || ||| | | | ||
Sbjct 1053294 CGTGACGAGGGCATGCACACCGACTTCGCCTGCCTTCTCTTCTCTCTCCTCGAGAACAAG 1053235
Query 94987 CCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAAGGATTC 95046
|| | | ||| || | |||| | | |||||||| ||||||||| | | |||
Sbjct 1053234 CCCAGCCCAGAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTC 1053175
Query 95047 ATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAAATGTCTGAATAT 95106
| || || || ||||||||||| |||| ||||| || |||| ||||
Sbjct 1053174 TTGAGCGACGCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATAC 1053115
Query 95107 ATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA-ATTTGGAACTC 95165
|| |||| || |||| | || || | || || | || | | | || |
Sbjct 1053114 ATCGAGTTCGTCGCTGACCGTCTGCTGTTGGCCCTC-GGCAACGTCAAGGTCTACCACGC 1053056
Query 95166 CAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGA 95225
|| || || || |||||||||||||||||| || | || ||||| |||||||||||
Sbjct 1053055 CACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGA 1052996
Query 95226 AAAGAGGGTTGGGGACTA 95243
||| | || || |||||
Sbjct 1052995 GAAGCGCGTCGGCGACTA 1052978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583259662641440
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