Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001572055.1_202016-02-24]
156 sequences; 34,355,870 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq7 82.4 6e-11
>seq7
Length=1637960
Score = 82.4 bits (90), Expect = 6e-11
Identities = 160/235 (68%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 27489 CATGTCCGT-GTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGT 27547
||||||| | |||||| || || ||||||| ||| ||||| ||||| || || ||||| |
Sbjct 246243 CATGTCCCTTGTACTCGGCGCCAAAATGCCGCCACTGGAAGCCGTATACTGGACCCAGCT 246302
Query 27548 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 27607
| || || || ||| | | |||| |||||| | | || | |||||| |||
Sbjct 246303 CGCCTTCCTCGTAGTGGTTTAGGCCCACCTTGTCGAGGTACTCCCGACTGCCGTTGCCGT 246362
Query 27608 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 27667
|||||||||| | || || ||||| ||| || |||| ||| ||| ||||
Sbjct 246363 CCCAGATCTTGATACCAGCGTCCGAGAGAGACTTGCTGTGTGTGCTGCCTGCGACAAACC 246422
Query 27668 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722
| |||| ||| | | ||||| ||| || || || || |||||||||||
Sbjct 246423 ATAGCAACTCGCCAATTACGGCACGAGTAAATACTCTTTTTGTTGTGAGGAGGGG 246477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369506497474436
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |