Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 >seq5 Length=1540376 Score = 107 bits (118), Expect = 2e-18 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||||| || || || || || || || ||||| || | ||||| ||||| | Sbjct 775405 CTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGAGAAATGTTCTC 775464 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | || | | |||| ||| ||| | | |||| ||| Sbjct 775465 CATGAAGTCGAAGGGGTTGGTGGCGTGGTAGACCTTGACGTTGCCGAGGGCCAACAGCAG 775524 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GA-TTGCGAATTCATGCCCAACATA 119819 || || || || ||||||||||||| ||||||| || | ||| |||||||| | || | Sbjct 775525 ACGGTCAGCGACGAACTCGATGTATTGGCACATGAGAGTAGCG--TTCATGCCGAGCAGA 775582 Query 119820 GCGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 ||| |||| || | | | ||||| |||| ||||| ||||| ||||| Sbjct 775583 GCGCATGGTAGTGCGTCGCTCAAGAACTCCTGCTCAATCTCGACGGCTTC 775632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661927320880