Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq10 98.7 9e-16 >seq10 Length=1117896 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGC 25080 ||||| || ||||||| |||| || ||||| || ||||||||||| || || ||| Sbjct 914579 ACCGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACTATCGA--CAATGTCAAGA 914636 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| ||||| || || ||||| || ||||| ||||| | || || ||||||| Sbjct 914637 GCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCGCTTGATCTTCGCCGGCA 914696 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 | || | || |||| |||||| || ||| ||||| || || || ||||| || || | Sbjct 914697 AGCAGCTTGAGGATGGTCGCACCTTGTCCGACTACAACATCCAGAAGGAATCTACCCTGC 914756 Query 25201 ATTTAGTGCT 25210 || | || || Sbjct 914757 ATCTCGTCCT 914766 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| |||| || || ||||||| |||| ||||| || Sbjct 915064 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTGGAATCAAGC 915123 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| | || | ||| ||||| || || ||||| || ||||| Sbjct 915124 GACACTATTGACAACGTCAAGTCGAAGATTCAG-GACAAGGAGGGTATTCCTCCGGACCA 915182 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || ||||| || || || ||||| | || ||| | || ||||| Sbjct 915183 ACAGCGTCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGCCGTACTCTCTCAGACTACAA 915242 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || ||||| ||||| Sbjct 915243 CATCCAAAAGGAGTCTACACTTCATTTGGTGCT 915275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327582786385