Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq5 125 2e-23
>seq5
Length=1540376
Score = 125 bits (138), Expect = 2e-23
Identities = 291/437 (67%), Gaps = 4/437 (1%)
Strand=Plus/Minus
Query 243319 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 243378
||||| ||||| | || ||| |||| | ||||||| ||||| ||| |||
Sbjct 775824 GTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGT 775765
Query 243379 GTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAA 243438
||||||| || || | || |||||| ||||| || ||||||||| | |||
Sbjct 775764 CTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCCCGTGACGAGGGCATGCACACC 775705
Query 243439 CAGTTCGGTGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAA--CGGTCA 243496
| |||| ||| | | || ||| ||||||||| ||| | | | | ||||
Sbjct 775704 GACTTCGCCTGCCTTCTCTTCTCTCTCCTCGAGAACAAGC--CCAGCCCAGAGTCTGTCA 775647
Query 243497 AACAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCAT 243556
| |||||||| ||||| || || | || |||| ||| | ||||||| | ||||
Sbjct 775646 GAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTCTTGAGCGACGCACTACCAT 775587
Query 243557 GCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACC 243616
|| || | ||||||||| || |||||| | || |||||||| ||||| || ||||
Sbjct 775586 GCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATACATCGAGTTCGTCGCTGACC 775527
Query 243617 GCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTA 243676
| | | | || || || | | || || ||| || ||| |||||||| | ||| |
Sbjct 775526 GTCTGCTGTTGGCCCTCGGCAACGTCAAGGTCTACCACGCCACCAACCCCTTCGACTTCA 775467
Query 243677 TGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATC 243736
||||| |||||| || || || || ||||||||||| ||||| ||| | || || |
Sbjct 775466 TGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACC 775407
Query 243737 AACGCCCTGGTGTGATG 243753
| ||||||| |||
Sbjct 775406 AGAAGGCTGGTGTCATG 775390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102878883678650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |