Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq10 113 5e-20 >seq10 Length=1117896 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || |||||||| |||| || || || ||||||| |||||||| || Sbjct 915488 GTAGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCCGTCTTCCAGCTGCTTACCA 915429 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| |||||||| || || || || || || || |||| Sbjct 915428 GCGAAGATGAGACGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTGGACTTT 915369 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || ||||| | || | |||||| ||||| | ||| Sbjct 915368 ACATTGTCGATCGTGTCGCTGGACTCGACTTCCAATGTAATGGTCTTTCCGGTAAGAGTC 915309 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 915308 TTGACGAAGATCTGCAT 915292 Score = 82.4 bits (90), Expect = 8e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || || |||||||| || | | |||||| | || Sbjct 914766 AGGACGAGATGCAGGGTAGATTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCC 914707 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||||||||| | || | ||||||||||| || ||||| || || || || Sbjct 914706 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 914647 Query 64352 TGTATTTT 64359 || || || Sbjct 914646 TGGATCTT 914639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644306600760