Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq16 257 2e-63
seq5 122 1e-22
>seq16
Length=840418
Score = 257 bits (284), Expect = 2e-63
Identities = 1117/1744 (64%), Gaps = 41/1744 (2%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
|||||| ||||| ||||||| || || | || || || || || || || || |
Sbjct 27513 CCCACAACACATGCTCATGCGTGTTGCTGTTGGCATTCACGGCGATGACATCGAGAAGGC 27454
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729
| ||||| |||||| | ||||| | ||| |||| ||||| | || || | |
Sbjct 27453 CATCGAGACCTACGACTACATGTCTCAAAAGTAC-TTCACACACGCCTCGCCGACGTTGT 27395
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
||||||| || |||||| ||| |||||||| || ||||| || | | |||||||
Sbjct 27394 TCAACGCGGGCACACCATCACCACAAATGTCGTCATGCTTCCTCATCGACATGAAGGAGG 27335
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849
| ||| | |||||||||| ||| |||| ||||| ||||| ||| ||||
Sbjct 27334 ACAGCATCGACGGCATTTACGACACACTCAAGACCTGTGCGTTGATCTCCAAGACCGCTG 27275
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907
| ||||| || | || | || | | || | | ||| || | | || ||
Sbjct 27274 GCGGTATTGGCCTCAACGTGCACCGCATTCGTGCTACT--GGCTCATACATCGGTGGCAC 27217
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| || ||| ||||| | ||||| ||||| || |||| ||| ||| || |||||
Sbjct 27216 TAACGGAACATCTAATGGTCTCATTCCCATGCTCCGTGTATACAACAACACTGCTCGCTA 27157
Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021
||| |||| | ||| ||||| ||| || |||| |||| || ||||||||
Sbjct 27156 TGTCGACCAGGGTGGCAACAAGCGTCC--AGGTGCCT-TCGCCATCTACCTCGAGCCATG 27100
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CG 112079
|||||| || || | | |||||||| |||| ||||| || | ||||||| ||
Sbjct 27099 GCACGCTGACGTCTTTGGCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG 27040
Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139
|| | ||||||||||||| |||||| |||||||| || |||||||||||| | ||| |
Sbjct 27039 CGCT--CGCGATCTCTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGTGTTCAA 26982
Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199
|| | ||||| ||| | || | || || || || || || ||| |||||| |
Sbjct 26981 GACAACGGCAACTGGACACTGATGTGCCCGAACGAGTGCCCTGGCCTCGCCGATGTCTAC 26922
Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG--GAAGAAAGTCGGGCGACTGCGA 112257
||||| || || ||||| || ||| | |||||| | |||| || || | ||
Sbjct 26921 GGTGAAGAATTCGAAGCTCTGTACGAGAGCTACGAGAAGCAGAACAAGGGTCG--CGAGA 26864
Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317
| || | || | | ||| | || || || || | || ||||||||||||| |
Sbjct 26863 CTGTTCGCGCACAAAAGCTTTGGTACGCCATCCTTGAGGCACAGACCGAGACTGGTAACC 26804
Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377
| | |||||| ||||| ||||| || |||| ||||| || || ||||| | ||| |
Sbjct 26803 CCTTTATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCA 26744
Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437
|| || |||||||| || || || || |||| | || | |||||| ||||
Sbjct 26743 TCCGCAGCTCCAACCTGTGCACTGAGATTGTGGAGTACACCGCTCCTGATGAGGTCGCTG 26684
Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTT 112496
| || ||| | || || | || || || | ||| || | || || | |||
Sbjct 26683 TTTGCAACTTGGCTTCTCTTGCCCTGCCTTCTTTTGTCGACTACA-AGGCCGGCGTGTTT 26625
Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556
|| | | || ||||||||||| || | ||||| ||| | |||| | ||
Sbjct 26624 GACTTCAAGAAGCTCCACGAAGTCACACAGGTCGTCACCCGCAACTTGAACAAGATCATC 26565
Query 112557 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616
|| || ||||| || || || || || | | ||||| || ||
Sbjct 26564 GAGGTCAACCACTACCCTGTCGAAGAGGCACGCCGCAGCAACTTCCGCCACCGACCCATC 26505
Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 112676
||| | ||||| |||||||| || |||| ||| | |||| | || || ||
Sbjct 26504 GGTATGGGTGTTCAAGGTCTTGCCGATGCCTTCCTCGCACTCCGCCTTCCTTTCGAGTCA 26445
Query 112677 GACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAG 112736
|||||||| ||| | |||| | || || ||||| || || || || |||||
Sbjct 26444 GACGAAGCTAAGAAGCTCAACATCCAAATCTTCGAGACCATCTACCATGCTGCTCTCACT 26385
Query 112737 GCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796
| | || | ||| ||| |||||| || | |||| || || ||||| |
Sbjct 26384 TCCTCATGCGACATCGCAAAGGAACTTGGTCCTTACAAGACCTACGAAGGATCTCCCGTA 26325
Query 112797 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACT 112854
|| || || | || || | ||||||| |||| || | ||| | || | || ||||
Sbjct 26324 TCCCAGGGTATCCTCCAGTACGATATGT-GGAATGTCACACCTA-CTGACCTCTGGGACT 26267
Query 112855 GGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 112914
||| |||| ||||| || ||| | ||| | || ||| || | || ||||
Sbjct 26266 GGGCGTCTCTGAAGGAGAAGATTGCTGAGCACGGTGTACGCAACTCGCTGCTCATTGCAC 26207
Query 112915 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 112974
| |||||||| |||||||| |||| || |||| || || || ||||| || || ||||
Sbjct 26206 CCATGCCAACTGCCTCCACTTCACAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACA 26147
Query 112975 CGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT- 113033
| | ||||||||| | | |||||| || ||||| | |||||||| |||
Sbjct 26146 CCTCCAACATCTATTCCCGCCGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAAC--CCATG 26089
Query 113034 -CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 113092
| | | ||||| || || ||||| ||||| || | |||||| | | || |
Sbjct 26088 GTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCTGAGAACATGAAGAACCGTATCAT 26029
Query 113093 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTA 113152
| || ||||| ||| | ||| | || || || || | |||| | ||
Sbjct 26028 CGCCGATGGAGGTTCGATTGCCAGGATTCCCAACATCCCTGAGGAGACAAAGACCCTTTA 25969
Query 113153 CCGCACAGTTTGGGAAATCAAG--ATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 113210
| || || ||||| ||| | |||||| ||||||| |||||||| || ||||||
Sbjct 25968 CAAGACCGTCTGGGAGATCTCGCAGCGAAGGA--TCATTGAGATGGCCGCTGACCGTGGT 25911
Query 113211 CGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCA 113268
|||||||| | |||| ||| | || | |||| | || || ||| ||
Sbjct 25910 GCTTTCATTGACC--AGTCTCAGTCGCTAAACATCCACATGAAGGAGCCTACTATGGGCA 25853
Query 113269 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 113328
|| || ||||||||||| | | |||||| |||||||| || || ||||| || |
Sbjct 25852 AGATCACTTCTATGCACTTTGCTGGCTGGAAGGCTGGTCTCAAGACTGGCATGTACTATC 25793
Query 113329 TCCG 113332
||||
Sbjct 25792 TCCG 25789
>seq5
Length=1540376
Score = 122 bits (134), Expect = 1e-22
Identities = 286/429 (67%), Gaps = 2/429 (0%)
Strand=Plus/Minus
Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251
||||| || ||||||||||||||||||| ||||| ||| | | || | ||||||
Sbjct 775836 GCATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATCTTCTGGCTC 775777
Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311
|||||||| ||||| ||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct 775776 AAGAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCCCGTGACGAG 775717
Query 102312 GGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTAAACCAACGACT 102371
|| | ||| || || || || ||| | | | || || | |
Sbjct 775716 GGCATGCACACCGACTTCGCCTGCCTTCTCTTCTCTCTCCTCGAGAACAAGCCCAGCCCA 775657
Query 102372 GAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGGGATTCATATTGGAT 102431
||| || | |||| | | |||||||| ||||||||| ||| ||| | ||
Sbjct 775656 GAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTCTTGAGCGAC 775597
Query 102432 GCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAATATATTGAGTAT 102491
|| || ||||||||||| |||| ||||| || |||| | |||| || ||||
Sbjct 775596 GCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATACATCGAGTTC 775537
Query 102492 GTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA-ATTTGGAACTCCAAGAATCC 102550
|| |||| | || || | || || | || | | | || ||| || ||
Sbjct 775536 GTCGCTGACCGTCTGCTGTTGGCCCTC-GGCAACGTCAAGGTCTACCACGCCACCAACCC 775478
Query 102551 ATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGT 102610
|| |||||||||||||||||| || | || ||||| ||||||||||| ||| | ||
Sbjct 775477 CTTCGACTTCATGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGCGT 775418
Query 102611 TGGGGACTA 102619
|| |||||
Sbjct 775417 CGGCGACTA 775409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620741787016880
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