Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq16 288 1e-72
seq5 113 5e-20
>seq16
Length=840418
Score = 288 bits (318), Expect = 1e-72
Identities = 1121/1740 (64%), Gaps = 33/1740 (2%)
Strand=Plus/Minus
Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270
|||||| ||||| ||||||| || || | ||||| ||||| || ||||| || |
Sbjct 27513 CCCACAACACATGCTCATGCGTGTTGCTGTTGGCATTCACGGCGATGACATCGAGAAGGC 27454
Query 75271 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 75329
| | ||||| |||||| | ||||| ||| ||| |||| ||||| | || || | |
Sbjct 27453 CATCGAGACCTACGACTACATGTCTCAAAAGTAC-TTCACACACGCCTCGCCGACGTTGT 27395
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| || || |||||| ||| || ||||| |||||||| |||| || |||||||
Sbjct 27394 TCAACGCGGGCACACCATCACCACAAATGTCGTCATGCTTCCTCATCGACATGAAGGAGG 27335
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| ||| |||| || || | || || | | |||||| ||||| ||| ||||
Sbjct 27334 ACAGCATCGACGGCATTTACGACACACTCAAGACCTGTGCGTTGATCTCCAAGACCGCTG 27275
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 75507
| |||||||| | || | || | | || | | ||| || |||| || ||
Sbjct 27274 GCGGTATTGGCCTCAACGTGCACCGCATTCGTGCTACTGG--CTCATACATCGGTGGCAC 27217
Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567
|| || ||| ||||| | ||||| ||||| || |||| ||| ||| || |||||
Sbjct 27216 TAACGGAACATCTAATGGTCTCATTCCCATGCTCCGTGTATACAACAACACTGCTCGCTA 27157
Query 75568 TGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATG 75621
||| | || | || ||||| ||| | || |||| ||||| | || |||||
Sbjct 27156 TGTCGACCAGGGTGGCAACAAGCGTCC--AGGTG-CCTTCGCCATCTACCTCGAGCCATG 27100
Query 75622 GCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCG 75681
||| || || || | | |||||||| | || ||||| || | || |||| ||
Sbjct 27099 GCACGCTGACGTCTTTGGCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG 27040
Query 75682 GTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741
| | |||||||| | | ||||||||||| ||||| ||||||||||| ||| | ||
Sbjct 27039 CGCTCGCGATCTCTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGTGTTCAAGA 26980
Query 75742 GGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGG 75801
|| | ||| | || | || || || || || || ||| |||| | ||
Sbjct 26979 CAACGGCAACTGGACACTGATGTGCCCGAACGAGTGCCCTGGCCTCGCCGATGTCTACGG 26920
Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861
||| || || ||||| || ||| | || || || || | | | ||||||
Sbjct 26919 TGAAGAATTCGAAGCTCTGTACGAGAGCTACGAGAAGCAGAACAAGGGTCGCGAGACTGT 26860
Query 75862 ACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921
| || | ||||| | || || || | ||||||| |||||||| | || |
Sbjct 26859 TCGCGCACAAAAGCTTTGGTACGCCATCCTTGAGGCACAGACCGAGACTGGTAACCCCTT 26800
Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981
|||||| |||||||| ||||| ||| ||||| ||||| ||||| | || || |||
Sbjct 26799 TATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATCCG 26740
Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041
||||| || || ||||| || ||| | |||||||| | | |||||| ||||||||
Sbjct 26739 CAGCTCCAACCTGTGCACTGAGATTGTGGAGTACACCGCTCCTGATGAGGTCGCTGTTTG 26680
Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTA 76101
||| ||||| || | ||||| || | |||| | | || | || ||||| |
Sbjct 26679 CAACTTGGCTTCTCTTGCCCTGCCTTCTTTTGTCGACTACAAGGCCGGCGTGTTTGACTT 26620
Query 76102 TGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAG 76161
| || || || ||| ||||| || | || ||| || | ||| |||| ||
Sbjct 26619 CAAGAAGCTCCACGAAGTCACACAGGTCGTCACCCGCAACTTGAACAAGATCATCGAGGT 26560
Query 76162 AAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTT 76221
|| || || || || || || || | || ||| |||| || ||| |
Sbjct 26559 CAACCACTACCCTGTCGAAGAGGCACGCCGCAGCAACTTCCGCCACCGACCCATCGGTAT 26500
Query 76222 GGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGA 76281
||||||||||||||| || |||| || | |||| | || || ||||| ||
Sbjct 26499 GGGTGTTCAAGGTCTTGCCGATGCCTTCCTCGCACTCCGCCTTCCTTTCGAGTCAGACGA 26440
Query 76282 AGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAG 76341
||| ||| || | || | ||||| || ||||| || || || | || |
Sbjct 26439 AGCTAAGAAGCTCAACATCCAAATCTTCGAGACCATCTACCATGCTGCTCTCACTTCCTC 26380
Query 76342 TTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCA 76401
|| || | || | | | ||| | || |||| | || || ||||||| |||||
Sbjct 26379 ATGCGACATCGCAAAGGAACTTGGTCCTTACAAGACCTACGAAGGATCTCCCGTATCCCA 26320
Query 76402 AGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAACTACGACTGGGAT 76459
|| | || |||| ||||||| |||| || | ||| | || | || |||||||
Sbjct 26319 GGGTATCCTCCAGTACGATATGT-GGAATGTCACACCTA-CTGACCTCTGGGACTGGGCG 26262
Query 76460 GTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 76519
||| ||||| || ||| | ||| | || ||| || | || ||||| |||
Sbjct 26261 TCTCTGAAGGAGAAGATTGCTGAGCACGGTGTACGCAACTCGCTGCTCATTGCACCCATG 26202
Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579
||||| |||||||| |||| || |||| || || || ||||| || |||||||| |
Sbjct 26201 CCAACTGCCTCCACTTCACAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCTCC 26142
Query 76580 AACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTC 76639
|||||||| | | |||||| |||||||| |||||||| | ||
Sbjct 26141 AACATCTATTCCCGCCGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAACCCATGGTTGCTC 26082
Query 76640 AATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCG 76699
|| ||||| | || ||||| ||||| || | |||||| | | || | |
Sbjct 26081 AAGGACCTTGTCGACATGGGTCTGTGGTCTGAGAACATGAAGAACCGTATCATCGCCGAT 26022
Query 76700 GGTGGTTCCATT--CAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCA 76757
|| ||||| ||| || || || || | ||||| || || | |||| || ||| |
Sbjct 26021 GGAGGTTCGATTGCCAGGAT-TCCCA-ACATCCCTGAGGAGACAAAGACCCTTTACAAGA 25964
Query 76758 CAGTGTGGGAAATCAAG--ATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTT 76815
| || ||||| ||| | ||| || ||||||| |||||||| || |||||| ||
Sbjct 25963 CCGTCTGGGAGATCTCGCAGCGAAGGA--TCATTGAGATGGCCGCTGACCGTGGTGCTTT 25906
Query 76816 CATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTC 76873
|||||| | |||| ||| | || | |||| | || || ||| |||| ||
Sbjct 25905 CATTGACC--AGTCTCAGTCGCTAAACATCCACATGAAGGAGCCTACTATGGGCAAGATC 25848
Query 76874 TCTTCTATGCA-TATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCCG 76932
|||||||||| | || || ||||| || ||||| || || ||||||||||||||
Sbjct 25847 ACTTCTATGCACTTTGCTGGC-TGGAAGGCTGGTCTCAAGACTGGCATGTACTATCTCCG 25789
>seq5
Length=1540376
Score = 113 bits (124), Expect = 5e-20
Identities = 300/454 (66%), Gaps = 16/454 (4%)
Strand=Plus/Minus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
|||||| | |||||| |||| || || ||| ||||||||||||||| ||| || |||
Sbjct 775854 TTCGCCAACCGCCTTGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTC 775795
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
| | || | ||| | |||||||| ||||| ||||| || ||| ||||| || ||
Sbjct 775794 GCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAG 775735
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTG 65250
|| || ||||| || ||||| | ||| || || ||| |||||| ||
Sbjct 775734 CTCATCTCCCGTGACGAGGGCATGCACACCGACTTCGCCTGCCTTCTCTTC-TCTCTCCT 775676
Query 65251 CG-TAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGA 65309
|| || | |||| | || || || || ||| | | || || || ||||||||
Sbjct 775675 CGAGAACAAGCCCAGCCCAGAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGA 775616
Query 65310 GAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGAT 65369
| | | |||| | |||||||| ||||| ||| |||| |||||| || ||
Sbjct 775615 GCAGGAGTTCTTGAGCGACGCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCAT 775556
Query 65370 GTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG---GGTGCCAC- 65425
|| | | ||||| |||| || | || ||||| || ||||| || ||
Sbjct 775555 GTGCCAATACATCGAGTTCGTCGCTGACCGTCTGCT-------GTTGGCCCTCGGCAACG 775503
Query 65426 CCA---TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGA 65482
|| | | |||| | || || || ||||| ||||| |||||| || | ||| |
Sbjct 775502 TCAAGGTCTACCACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGCTGGTA 775443
Query 65483 AGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
||||||||||||| |||||||| || || |||||
Sbjct 775442 AGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 775409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569010887520
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