Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq26 104 9e-17
>seq26
Length=492030
Score = 104 bits (114), Expect = 9e-17
Identities = 153/207 (74%), Gaps = 10/207 (5%)
Strand=Plus/Minus
Query 309643 ACCCTCTCGCCCCTCAAAG-CTCCAACCTTCGAT-GC-GACAATCTCCATCAACTTGGCG 309699
||||||| | ||| || | | || ||||| || || |||| ||| ||||| | |||
Sbjct 250663 ACCCTCTTGTCCCGTAATGGCACCGACCTTGGAGAGCAGACA--CTCGATCAAATGGGCA 250606
Query 309700 ATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTCAGGTCTCATTCCGGTG 309759
|| ||||||||||| |||||||| | |||||||||| | || ||| | | ||| |
Sbjct 250605 ATTGTCATACGAGACGGAATGGCGTGGGGGTTGATGATCAGATCCGGTGTGAGTCCC-TC 250547
Query 309760 ATTGGGTTGAAAGGCATATCTTCTTCA-GGTACAATCAAACCAATAGTTCCCTTTTGAGC 309818
||| ||| ||||||||||| | |||| | | |||||| |||||||||||| |
Sbjct 250546 CCTGGA--GAATGGCATATCTTCCTGGCGGTAGG-TGATACCAATGGTTCCCTTTTGACC 250490
Query 309819 GTGCCTGGAAGCAAACTTGTCACCAAT 309845
||| | ||||||||||||||||||||
Sbjct 250489 GTGACGAGAAGCAAACTTGTCACCAAT 250463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951972424235912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |