Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq28 87.8 1e-11 >seq28 Length=367513 Score = 87.8 bits (96), Expect = 1e-11 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 435127 CCTTTTGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATT 435186 |||| ||||| |||||||| | |||||||||||||||||| | ||| ||||||| | Sbjct 347934 CCTTCGGAATTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTTTGATTGATACAGCAGTC 347993 Query 435187 AAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTA 435244 || || || || |||||||| || ||| | || |||||| ||| |||||| ||| Sbjct 347994 AAGACAGCCGAGACTGGTTACATCCAACGTCGTCTCGTCAAGGCGCTCGAAGATGTTA 348051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740626521433854