Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11] 79 sequences; 32,990,834 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq10 91.5 3e-13 >seq10 Length=1117896 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG-- 206230 ||||| || ||| || || || ||||| || || || |||||||| || || | | Sbjct 915295 CAGATCTTCGTCAAGACTCTTACCGGAAAGACCATTACATTGGAAGTCGA--GTCCAGCG 915352 Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290 |||| |||| |||||| ||||| || || || || || ||| |||||| | Sbjct 915353 ACACGATCGACAATGTAAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGC 915412 Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350 | | || |||||||| || |||||| ||||||| || | || | | || |||||| Sbjct 915413 AGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGCCGAACGCTCTCAGACTACAACA 915472 Query 206351 TCCAGAAAGAGTCTACTCTTCAC 206373 ||||||| ||||||||||| ||| Sbjct 915473 TCCAGAAGGAGTCTACTCTCCAC 915495 Score = 89.7 bits (98), Expect = 1e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || || || || ||| |||||| || | || ||||||||||||||| Sbjct 915148 AAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAACAGCGTCTCATCTTCGCCGGAAAG 915207 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||||||||||| || | ||| | | || |||||| |||| || |||||||| ||||| Sbjct 915208 CAGTTGGAAGACGGCCGTACTCTCTCAGACTACAACATCCAAAAGGAGTCTACACTTCA 915266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819603775759