Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq10 91.5 3e-13
>seq10
Length=1117896
Score = 91.5 bits (100), Expect = 3e-13
Identities = 143/203 (70%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTG-- 206230
||||| || ||| || || || ||||| || || || |||||||| || || | |
Sbjct 915295 CAGATCTTCGTCAAGACTCTTACCGGAAAGACCATTACATTGGAAGTCGA--GTCCAGCG 915352
Query 206231 ACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTC 206290
|||| |||| |||||| ||||| || || || || || ||| |||||| |
Sbjct 915353 ACACGATCGACAATGTAAAGTCCAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAGC 915412
Query 206291 AAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 206350
| | || |||||||| || |||||| ||||||| || | || | | || ||||||
Sbjct 915413 AGCGTCTCATCTTCGCTGGTAAGCAGCTGGAAGACGGCCGAACGCTCTCAGACTACAACA 915472
Query 206351 TCCAGAAAGAGTCTACTCTTCAC 206373
||||||| ||||||||||| |||
Sbjct 915473 TCCAGAAGGAGTCTACTCTCCAC 915495
Score = 89.7 bits (98), Expect = 1e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
|||||||| || || || || ||| |||||| || | || |||||||||||||||
Sbjct 915148 AAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAACAGCGTCTCATCTTCGCCGGAAAG 915207
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372
||||||||||| || | ||| | | || |||||| |||| || |||||||| |||||
Sbjct 915208 CAGTTGGAAGACGGCCGTACTCTCTCAGACTACAACATCCAAAAGGAGTCTACACTTCA 915266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181819603775759
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |