Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001642055.1_202016-05-11]
79 sequences; 32,990,834 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq16 298 6e-76
seq5 113 5e-20
>seq16
Length=840418
Score = 298 bits (330), Expect = 6e-76
Identities = 1126/1743 (65%), Gaps = 39/1743 (2%)
Strand=Plus/Minus
Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280
|||||| ||||| ||||||| || || | || ||||| || || ||||| || |
Sbjct 27513 CCCACAACACATGCTCATGCGTGTTGCTGTTGGCATTCACGGCGATGACATCGAGAAGGC 27454
Query 104281 CTTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCT 104339
| | ||||| |||||| | ||||| ||| ||| |||| ||||| | || || | |
Sbjct 27453 CATCGAGACCTACGACTACATGTCTCAAAAGTAC-TTCACACACGCCTCGCCGACGTTGT 27395
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| || || |||||| ||| |||||||| |||||||| |||| || |||||||
Sbjct 27394 TCAACGCGGGCACACCATCACCACAAATGTCGTCATGCTTCCTCATCGACATGAAGGAGG 27335
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| ||| |||| || || | || || | | |||||| ||||| ||| ||||
Sbjct 27334 ACAGCATCGACGGCATTTACGACACACTCAAGACCTGTGCGTTGATCTCCAAGACCGCTG 27275
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517
| |||||||| | || | || | | || | | ||| || |||| || ||
Sbjct 27274 GCGGTATTGGCCTCAACGTGCACCGCATTCGTGCTACTGG--CTCATACATCGGTGGCAC 27217
Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577
|| || ||| ||||| | ||||| ||||| || |||| ||| ||| || |||||
Sbjct 27216 TAACGGAACATCTAATGGTCTCATTCCCATGCTCCGTGTATACAACAACACTGCTCGCTA 27157
Query 104578 TGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631
||| | || | ||| ||||| | || | |||| |||| || ||||||||
Sbjct 27156 TGTCGACCAGGGTGGCAACAAGCGTCCA---GGTGCCTTCGCCATCTACCTCGAGCCATG 27100
Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CG 104689
|||||| || || | | |||||||| |||| ||||| || | ||||||| ||
Sbjct 27099 GCACGCTGACGTCTTTGGCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG 27040
Query 104690 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 104749
|| | ||||||||||||| |||||| |||||||| || |||||||||||| | ||| |
Sbjct 27039 CGCT--CGCGATCTCTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGTGTTCAA 26982
Query 104750 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809
|| | ||||| ||| | || | || || || || ||||| ||| |||||| |
Sbjct 26981 GACAACGGCAACTGGACACTGATGTGCCCGAACGAGTGCCCTGGCCTCGCCGATGTCTAC 26922
Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGAC-TGCGAC 104868
||||| || || ||||| || ||| | ||||| |||| || | | | | | |||
Sbjct 26921 GGTGAAGAATTCGAAGCTCTGTACGAGAGCTACGA-GAAGCAGAACAAGGGTCGCGAGAC 26863
Query 104869 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928
|| | || | | ||| | || || || || | || ||||||||||||| ||
Sbjct 26862 TGTTCGCGCACAAAAGCTTTGGTACGCCATCCTTGAGGCACAGACCGAGACTGGTAACCC 26803
Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988
| ||||| ||||| ||||| || |||| ||||| || || ||||| | ||| ||
Sbjct 26802 CTTTATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCAT 26743
Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048
| || ||||| || || || || || |||| | || | |||||| |||||
Sbjct 26742 CCGCAGCTCCAACCTGTGCACTGAGATTGTGGAGTACACCGCTCCTGATGAGGTCGCTGT 26683
Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTTG 105107
|| ||| | || || | || || || | ||| || | || || | ||||
Sbjct 26682 TTGCAACTTGGCTTCTCTTGCCCTGCCTTCTTTTGTCGACTACA-AGGCCGGCGTGTTTG 26624
Query 105108 ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTG 105167
| | | || ||||||||||| || | |||||| ||| | |||| | || |
Sbjct 26623 ACTTCAAGAAGCTCCACGAAGTCACACAGGTCGTCACCCGCAACTTGAACAAGATCATCG 26564
Query 105168 ATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 105227
| || ||||| || || || || || | | ||||| || || |
Sbjct 26563 AGGTCAACCACTACCCTGTCGAAGAGGCACGCCGCAGCAACTTCCGCCACCGACCCATCG 26504
Query 105228 GTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCG 105287
|| | |||||||| ||||| || |||| ||| | |||| | || || || |
Sbjct 26503 GTATGGGTGTTCAAGGTCTTGCCGATGCCTTCCTCGCACTCCGCCTTCCTTTCGAGTCAG 26444
Query 105288 ACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGG 105347
||||||| ||| | |||| | || || |||||||| || || || |||||
Sbjct 26443 ACGAAGCTAAGAAGCTCAACATCCAAATCTTCGAGACCATCTACCATGCTGCTCTCACTT 26384
Query 105348 CGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 105407
| | || | ||| ||| |||||| || | |||| || || ||||| | |
Sbjct 26383 CCTCATGCGACATCGCAAAGGAACTTGGTCCTTACAAGACCTACGAAGGATCTCCCGTAT 26324
Query 105408 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTG 105465
| || || | || || | ||||||| |||| || | ||| | || | || |||||
Sbjct 26323 CCCAGGGTATCCTCCAGTACGATATGT-GGAATGTCACACCTA-CTGACCTCTGGGACTG 26266
Query 105466 GGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525
|| |||| ||||| || ||| | ||| | || ||| || ||||| || ||
Sbjct 26265 GGCGTCTCTGAAGGAGAAGATTGCTGAGCACGGTGTACGCAACTCGCTGCTCATTGCACC 26206
Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585
|||||||| |||||||| |||| || |||| || || || ||||| || || |||||
Sbjct 26205 CATGCCAACTGCCTCCACTTCACAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACAC 26146
Query 105586 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT-- 105643
| ||||||||| | | |||||| || ||||| | |||||||| |||
Sbjct 26145 CTCCAACATCTATTCCCGCCGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAAC--CCATGG 26088
Query 105644 CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTG 105703
| | | ||||| || || ||||| ||||| || | |||||| | | || |
Sbjct 26087 TTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCTGAGAACATGAAGAACCGTATCATC 26028
Query 105704 AAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTAC 105763
| || ||||| ||| | ||| | || || | || | |||| | |||
Sbjct 26027 GCCGATGGAGGTTCGATTGCCAGGATTCCCAACATCCCTGAGGAGACAAAGACCCTTTAC 25968
Query 105764 CGCACAGTTTGGGAAATCAAG--ATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTC 105821
|| || ||||| ||| | |||||| ||||||| |||||||| || ||||||
Sbjct 25967 AAGACCGTCTGGGAGATCTCGCAGCGAAGGA--TCATTGAGATGGCCGCTGACCGTGGTG 25910
Query 105822 GCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAACGATGTCCAA 105879
|||||||| | |||| ||| | || || |||| | || || ||| |||
Sbjct 25909 CTTTCATTGACC--AGTCTCAGTCGCTAAACATCCACATGAAGGAGCCTACTATGGGCAA 25852
Query 105880 GCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCT 105939
| || ||||||||||| | | |||||| |||||||| || || ||||| || ||
Sbjct 25851 GATCACTTCTATGCACTTTGCTGGCTGGAAGGCTGGTCTCAAGACTGGCATGTACTATCT 25792
Query 105940 CCG 105942
|||
Sbjct 25791 CCG 25789
>seq5
Length=1540376
Score = 113 bits (124), Expect = 5e-20
Identities = 284/429 (66%), Gaps = 2/429 (0%)
Strand=Plus/Minus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875
||||| || ||||||||||||||||||| ||||| ||| | | || | ||||||
Sbjct 775836 GCATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATCTTCTGGCTC 775777
Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935
|||||||| ||||| ||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct 775776 AAGAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCCCGTGACGAG 775717
Query 94936 GGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTAAACCAACGACT 94995
|| | ||| || || || || ||| | | | || || | |
Sbjct 775716 GGCATGCACACCGACTTCGCCTGCCTTCTCTTCTCTCTCCTCGAGAACAAGCCCAGCCCA 775657
Query 94996 GAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAAGGATTCATATTGGAT 95055
||| || | |||| | | |||||||| ||||||||| | | ||| | ||
Sbjct 775656 GAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTCTTGAGCGAC 775597
Query 95056 GCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAAATGTCTGAATATATTGAGTAT 95115
|| || ||||||||||| |||| ||||| || |||| |||| || ||||
Sbjct 775596 GCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATACATCGAGTTC 775537
Query 95116 GTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA-ATTTGGAACTCCAAGAATCC 95174
|| |||| | || || | || || | || | | | || ||| || ||
Sbjct 775536 GTCGCTGACCGTCTGCTGTTGGCCCTC-GGCAACGTCAAGGTCTACCACGCCACCAACCC 775478
Query 95175 ATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGT 95234
|| |||||||||||||||||| || | || ||||| ||||||||||| ||| | ||
Sbjct 775477 CTTCGACTTCATGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGAGAAGCGCGT 775418
Query 95235 TGGGGACTA 95243
|| |||||
Sbjct 775417 CGGCGACTA 775409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260224029960
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