Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01] 547 sequences; 33,016,309 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq504 89.7 4e-13 >seq504 Length=802703 Score = 89.7 bits (98), Expect = 4e-13 Identities = 134/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 19041 TACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTT 19100 ||||||||||| | |||||||| || || ||||| |||||||| || || || ||| Sbjct 590367 TACCAGAGATCCTGCGATATGGGTCTCGGTGTACCTTTCAACATCGCCTCCTACGCGCTT 590426 Query 19101 CTTACCTACATAGTAGCGCATGT-TACAGGACTTAAAACC--GGAGATTTAATTCATACA 19157 || ||| |||| |||| ||||| | | ||| ||| || | | |||| | |||||| Sbjct 590427 CTCACCCACATGCTAGCTCATGTGTGC--GACCTAACGCCCGGTACATTT-ACACATACA 590483 Query 19158 ATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCT--AGCTC 19215 ||||| |||||||| | || | | || |||||||| | || |||||||| ||| | Sbjct 590484 ATGGGCGATGCACACGTATATATCGACCACATAGATGCGCTCAAGGTGCAGCTGGAGCGC 590543 Query 19216 GATCC 19220 || || Sbjct 590544 GAACC 590548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399501336681615