Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01]
547 sequences; 33,016,309 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq88 257 2e-63
seq23 129 7e-25
>seq88
Length=290544
Score = 257 bits (284), Expect = 2e-63
Identities = 1117/1744 (64%), Gaps = 41/1744 (2%)
Strand=Plus/Minus
Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670
|||||| ||||| ||||||| || || | || || || || || || || || |
Sbjct 180612 CCCACAACACATGCTCATGCGTGTTGCTGTTGGCATTCACGGCGATGACATCGAGAAGGC 180553
Query 111671 TTTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCT 111729
| ||||| |||||| | ||||| | ||| |||| ||||| | || || | |
Sbjct 180552 CATCGAGACCTACGACTACATGTCTCAAAAGTAC-TTCACACACGCCTCGCCGACGTTGT 180494
Query 111730 TCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGG 111789
||||||| || |||||| ||| |||||||| || ||||| || | | |||||||
Sbjct 180493 TCAACGCGGGCACACCATCACCACAAATGTCGTCATGCTTCCTCATCGACATGAAGGAGG 180434
Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849
| ||| | |||||||||| ||| |||| ||||| ||||| ||| ||||
Sbjct 180433 ACAGCATCGACGGCATTTACGACACACTCAAGACCTGTGCGTTGATCTCCAAGACCGCTG 180374
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907
| ||||| || | || | || | | || | | ||| || | | || ||
Sbjct 180373 GCGGTATTGGCCTCAACGTGCACCGCATTCGTGCTACT--GGCTCATACATCGGTGGCAC 180316
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| || ||| ||||| | ||||| ||||| || |||| ||| ||| || |||||
Sbjct 180315 TAACGGAACATCTAATGGTCTCATTCCCATGCTCCGTGTATACAACAACACTGCTCGCTA 180256
Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021
||| |||| | ||| ||||| ||| || |||| |||| || ||||||||
Sbjct 180255 TGTCGACCAGGGTGGCAACAAGCGTCC--AGGTGCCT-TCGCCATCTACCTCGAGCCATG 180199
Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CG 112079
|||||| || || | | |||||||| |||| ||||| || | ||||||| ||
Sbjct 180198 GCACGCTGACGTCTTTGGCTTCCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGGTCCG 180139
Query 112080 CGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAG 112139
|| | ||||||||||||| |||||| |||||||| || |||||||||||| | ||| |
Sbjct 180138 CGCT--CGCGATCTCTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGTGTTCAA 180081
Query 112140 GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG 112199
|| | ||||| ||| | || | || || || || || || ||| |||||| |
Sbjct 180080 GACAACGGCAACTGGACACTGATGTGCCCGAACGAGTGCCCTGGCCTCGCCGATGTCTAC 180021
Query 112200 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG--GAAGAAAGTCGGGCGACTGCGA 112257
||||| || || ||||| || ||| | |||||| | |||| || || | ||
Sbjct 180020 GGTGAAGAATTCGAAGCTCTGTACGAGAGCTACGAGAAGCAGAACAAGGGTCG--CGAGA 179963
Query 112258 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 112317
| || | || | | ||| | || || || || | || ||||||||||||| |
Sbjct 179962 CTGTTCGCGCACAAAAGCTTTGGTACGCCATCCTTGAGGCACAGACCGAGACTGGTAACC 179903
Query 112318 CATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 112377
| | |||||| ||||| ||||| || |||| ||||| || || ||||| | ||| |
Sbjct 179902 CCTTTATGCTCTACAAGGACGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCA 179843
Query 112378 TCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 112437
|| || |||||||| || || || || |||| | || | |||||| ||||
Sbjct 179842 TCCGCAGCTCCAACCTGTGCACTGAGATTGTGGAGTACACCGCTCCTGATGAGGTCGCTG 179783
Query 112438 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTT 112496
| || ||| | || || | || || || | ||| || | || || | |||
Sbjct 179782 TTTGCAACTTGGCTTCTCTTGCCCTGCCTTCTTTTGTCGACTACA-AGGCCGGCGTGTTT 179724
Query 112497 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATT 112556
|| | | || ||||||||||| || | ||||| ||| | |||| | ||
Sbjct 179723 GACTTCAAGAAGCTCCACGAAGTCACACAGGTCGTCACCCGCAACTTGAACAAGATCATC 179664
Query 112557 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 112616
|| || ||||| || || || || || | | ||||| || ||
Sbjct 179663 GAGGTCAACCACTACCCTGTCGAAGAGGCACGCCGCAGCAACTTCCGCCACCGACCCATC 179604
Query 112617 GGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCC 112676
||| | ||||| |||||||| || |||| ||| | |||| | || || ||
Sbjct 179603 GGTATGGGTGTTCAAGGTCTTGCCGATGCCTTCCTCGCACTCCGCCTTCCTTTCGAGTCA 179544
Query 112677 GACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAG 112736
|||||||| ||| | |||| | || || ||||| || || || || |||||
Sbjct 179543 GACGAAGCTAAGAAGCTCAACATCCAAATCTTCGAGACCATCTACCATGCTGCTCTCACT 179484
Query 112737 GCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 112796
| | || | ||| ||| |||||| || | |||| || || ||||| |
Sbjct 179483 TCCTCATGCGACATCGCAAAGGAACTTGGTCCTTACAAGACCTACGAAGGATCTCCCGTA 179424
Query 112797 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACT 112854
|| || || | || || | ||||||| |||| || | ||| | || | || ||||
Sbjct 179423 TCCCAGGGTATCCTCCAGTACGATATGT-GGAATGTCACACCTA-CTGACCTCTGGGACT 179366
Query 112855 GGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 112914
||| |||| ||||| || ||| | ||| | || ||| || | || ||||
Sbjct 179365 GGGCGTCTCTGAAGGAGAAGATTGCTGAGCACGGTGTACGCAACTCGCTGCTCATTGCAC 179306
Query 112915 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 112974
| |||||||| |||||||| |||| || |||| || || || ||||| || || ||||
Sbjct 179305 CCATGCCAACTGCCTCCACTTCACAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACA 179246
Query 112975 CGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCAT- 113033
| | ||||||||| | | |||||| || ||||| | |||||||| |||
Sbjct 179245 CCTCCAACATCTATTCCCGCCGTGTCCTCGCTGGTGAGTTCCAGGTTGTCAAC--CCATG 179188
Query 113034 -CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 113092
| | | ||||| || || ||||| ||||| || | |||||| | | || |
Sbjct 179187 GTTGCTCAAGGACCTTGTCGACATGGGTCTGTGGTCTGAGAACATGAAGAACCGTATCAT 179128
Query 113093 GAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTA 113152
| || ||||| ||| | ||| | || || || || | |||| | ||
Sbjct 179127 CGCCGATGGAGGTTCGATTGCCAGGATTCCCAACATCCCTGAGGAGACAAAGACCCTTTA 179068
Query 113153 CCGCACAGTTTGGGAAATCAAG--ATGAAGGATGTCATTGACATGGCCGCAGATCGTGGT 113210
| || || ||||| ||| | |||||| ||||||| |||||||| || ||||||
Sbjct 179067 CAAGACCGTCTGGGAGATCTCGCAGCGAAGGA--TCATTGAGATGGCCGCTGACCGTGGT 179010
Query 113211 CGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCA 113268
|||||||| | |||| ||| | || | |||| | || || ||| ||
Sbjct 179009 GCTTTCATTGACC--AGTCTCAGTCGCTAAACATCCACATGAAGGAGCCTACTATGGGCA 178952
Query 113269 AGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACC 113328
|| || ||||||||||| | | |||||| |||||||| || || ||||| || |
Sbjct 178951 AGATCACTTCTATGCACTTTGCTGGCTGGAAGGCTGGTCTCAAGACTGGCATGTACTATC 178892
Query 113329 TCCG 113332
||||
Sbjct 178891 TCCG 178888
>seq23
Length=86929
Score = 129 bits (142), Expect = 7e-25
Identities = 293/438 (67%), Gaps = 2/438 (0%)
Strand=Plus/Minus
Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATT 102242
|| ||| | ||||| || ||||||||||||||||||| ||||| ||| | | ||
Sbjct 34928 CGCCTCGTTGCATTCGCCGCTGTTGAGGGTATCTTCTTCAGCGGTTCTTTCGCCTCCATC 34869
Query 102243 TATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCT 102302
| |||||||||||||| ||||| ||||| ||||| |||||||||||||| ||||||
Sbjct 34868 TTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGTCTAACATTCTCCAACGAGCTCATCTCT 34809
Query 102303 CGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCAAATTATTGCGTATTAAA 102362
||||||||||| | ||| || || || || ||| | | | ||
Sbjct 34808 CGTGACGAGGGCATGCACACCGACTTCGCCTGCCTTCTCTTCTCTCTCCTCGAGAACAAG 34749
Query 102363 CCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTGAGATTGAGAAGGGATTC 102422
|| | | ||| || | |||| | | |||||||| ||||||||| ||| |||
Sbjct 34748 CCCAGCCCAGAGTCTGTCAGAGCTATCATCACTGAAGCCGTCGAGATTGAGCAGGAGTTC 34689
Query 102423 ATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTGAAAAGATGTCCGAATAT 102482
| || || || ||||||||||| |||| ||||| || |||| | ||||
Sbjct 34688 TTGAGCGACGCACTACCATGCGCTCTGCTCGGCATGAACGCTACTCTCATGTGCCAATAC 34629
Query 102483 ATTGAGTATGTATCTGATAGATTGTTGAAGCAGATCGGGGTGCCTCCA-ATTTGGAACTC 102541
|| |||| || |||| | || || | || || | || | | | || |
Sbjct 34628 ATCGAGTTCGTCGCTGACCGTCTGCTGTTGGCCCTC-GGCAACGTCAAGGTCTACCACGC 34570
Query 102542 CAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGA 102601
|| || || || |||||||||||||||||| || | || ||||| |||||||||||
Sbjct 34569 CACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGCTGGTAAGACCAACTTCTTCGA 34510
Query 102602 AAAGAGGGTTGGGGACTA 102619
||| | || || |||||
Sbjct 34509 GAAGCGCGTCGGCGACTA 34492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620738155673840
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