Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01] 547 sequences; 33,016,309 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq149 86.0 8e-12 >seq149 Length=38680 Score = 86.0 bits (94), Expect = 8e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 44428 GACTTCATTGGTATGGACATGGCGCGAAAATTCTTGGAGATGGGTTTTACAAGAGCACGT 44487 ||||||||||| ||||||||| | || ||||||||| ||||||| | || || ||| Sbjct 11637 GACTTCATTGGCATGGACATGTCTCGCAAATTCTTGCAGATGGGCATGACTAGGGCAAAG 11696 Query 44488 CGCTATGCTAATCATTCCAGTGGAAGGAAGTACGATAAAATGTCTGG 44534 | ||||| || ||| || | ||||| ||||| ||||||| | |||| Sbjct 11697 AGATATGCAAACCATGCCGGGGGAAGAAAGTATGATAAAAAGACTGG 11743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610392626411880