Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01] 547 sequences; 33,016,309 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq504 87.8 1e-12 >seq504 Length=802703 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 30150 CATGTCCGT-GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208 ||||||| | |||||| || || ||||||| ||||||||| ||||| || || ||||| | Sbjct 590145 CATGTCCCTTGTACTCGGCGCCAAAATGCCGCCACTGGAAGCCGTATACTGGACCCAGCT 590086 Query 30209 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268 | || || || ||| | | |||| |||||| | | || | |||||| ||| Sbjct 590085 CGCCTTCCTCGTAGTGGTTTAGGCCCACCTTGTCGAGGTACTCCCGACTGCCGTTGCCGT 590026 Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30328 |||||||||| | || || ||||| ||| || |||| ||| ||| |||| Sbjct 590025 CCCAGATCTTGATACCAGCGTCCGAGAGAGACTTGCTGTGTGTGCTGCCTGCGACAAACC 589966 Query 30329 ACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | |||| ||| | | ||||| ||| || || || || ||||||||||| Sbjct 589965 ATAGCAACTCGCCAATTACGGCACGAGTAAATACTCTTTTTGTTGTGAGGAGGGG 589911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408614875925231