Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01]
547 sequences; 33,016,309 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq88 277 3e-69
seq23 271 1e-67
>seq88
Length=290544
Score = 277 bits (306), Expect = 3e-69
Identities = 1037/1605 (65%), Gaps = 62/1605 (4%)
Strand=Plus/Plus
Query 212577 GCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCC--CCAGCCGTGCA 212634
|||||| |||| || |||||||||||||| ||||| || || ||| |||||| |
Sbjct 178876 GCAGCCATGGTACGGAGATAGTACATGCCAGTCTTGAGACCA--GCCTTCCAGCCAGCAA 178933
Query 212635 TGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTA 212694
|||||| | |||| |||| | || || || | || || || |
Sbjct 178934 AGTGCATAGAAGTGA---TCTTGCCCATAGTAGGCTCCT-----TCATG-------TGGA 178978
Query 212695 GGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATAT 212754
||| || |||||| |||||| ||||| | | | |||||||||||| || |||||
Sbjct 178979 TGTTTAGCGACTGAGACTGGTCAATGAAAGCACCACGGTCAGCGGCCATCTCAATGATCC 179038
Query 212755 CTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT-TCTTTGAGGTCCTCTGGGAAGCCG 212813
|| ||| |||| |||||| ||||||||| | | |||||| ||||| |||| | |
Sbjct 179039 TTCGCTGCGAGATCTCCCAGACGGTCTTGTAAAGGGTCTTTGTC-TCCTCAGGGATGTTG 179097
Query 212814 GGGATGTTCTGCA--CAGACCCCCTGTGT--ATGGTCAGCTGCAGGCGCATGTCCTCGTT 212869
|| || | ||| | ||| || | ||| | | | | ||||| |||
Sbjct 179098 GGAATCCTG-GCAATCGAACCTCCATCGGCGATGATACGGTTCTT---CATGTTCTCAGA 179153
Query 212870 CCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACC 212929
||| || ||| || | ||| ||||| || |||||||| | |||||| |||||
Sbjct 179154 CCACAGACCCATGTCGACAAGGTCCTTGAGCAACCATGGGTTGACAACCTGGAACTCACC 179213
Query 212930 TGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCC 212989
| ||| || | | || | ||| || ||||| ||||||| || ||||||||| ||
Sbjct 179214 AGCGAGGACACGGCGGGAATAGATGTTGGAGGTGTATGGCTCGAAGCACTCGTTGTTGCC 179273
Query 212990 CAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCC 213049
||||||||||| |||| ||| || |||||||| || | || || ||| | || ||
Sbjct 179274 CAGAATCTGTGAAGTGGAGGCAGTTGGCATGGGTGCAATGAGCAGCGAGTTGCGTACACC 179333
Query 213050 GTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTC 213109
|||||| | || | || ||||||||||| | ||| ||||
Sbjct 179334 GTGCTCAGCAATCTTCTCCTTCAGAGACGCCCAGTCCCAGAGGTCAGT-AGGTG------ 179386
Query 213110 CTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGA 213169
| || |||||||| || |||| | ||| || | | ||||| || | ||| |
Sbjct 179387 --TGACATTCCACATATCGTACTGGAGGATACCCTGGGATACGGGAGATCCTTCGTAGGT 179444
Query 213170 GGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGAT 213229
||| || ||| | ||||| || | ||||| || | || ||||| | ||||||
Sbjct 179445 CTTGTAAGGACCAAGTTCCTTTGCGATGTCGCATGAGGAAGTGAGAGCAGCATGGTAGAT 179504
Query 213230 GGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCA- 213288
||| || || || | ||||||||||||| || || ||| ||| || | |
Sbjct 179505 GGTCTCGAAGATTTGGATGTTGAGCTTCTTAGCTTCGTCTGACTCGAAAGGAAGGCGGAG 179564
Query 213289 TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGT 213348
|||| |||| |||| || || || || || || || |||||||||| ||| | | ||
Sbjct 179565 TGCGA-GGAAGGCATCGGCAAGACCTTGAACACCCATACCGATGGGTCGGTGGCGGAAGT 179623
Query 213349 TAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTG 213407
| | | || ||| || | ||||| |||| |||||||||||||| | ||||
Sbjct 179624 TGCTGCGGCGTGC-CTCTTCGACAGGGTAGTGGTTGACCTCGATGATCTTGTTCAAGTTG 179682
Query 213408 CGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCC 213467
|||||| | || | ||||| | | || | || | | |||||| | || ||
Sbjct 179683 CGGGTGACGACCTGTGTGACTTCGTGGAGCTTCTTGAAGTCAAACACGCCGGCCTTGTAG 179742
Query 213468 TGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCT 213527
| ||||| ||||||||| | |||| ||||||||| || ||||| | || |
Sbjct 179743 TCGACAAAAGAAGGCAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCG 179802
Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587
|||||||||| ||||| |||||||||||| || |||||||| || ||||||| |||
Sbjct 179803 GTGTACTCCACAATCTCAGTGCACAGGTTGGAGCTGCGGATGGTACCGAGGTTCTTCTGG 179862
Query 213588 TTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGG 213647
|| ||| |||| || |||||||||||||| ||||| || ||||| |||
Sbjct 179863 TTGCTCTTGCGGTTGCAAGCGTCCTTGTAGAGCATAAAGGGGTTACCAGTCTCGGTCTGT 179922
Query 213648 GACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGC 213707
| | | || || | ||| || | || | || || | | ||| || |
Sbjct 179923 GCCTCAAGGATGGCGTACCAAAGCT-TTTGTGCGCGAACAGTCTCGCGAC----CCTTGT 179977
Query 213708 GTAGC--CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTC 213765
|| |||||| ||||| || | | |||||| | || |||| | | || |
Sbjct 179978 TCTGCTTCTCGTAGCTCTCGTACAGAGCTTCGAATTCTTCACCGTAGACATCGGCGAGGC 180037
Query 213766 CCGGACA-GGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATG 213824
| || || | |||| ||||| || |||||| |||| ||| || | || ||||
Sbjct 180038 CAGGGCACTCGTTCGGG-CACATCAGTGTCCAGTTGCCGTTGTCTTGAACACGCTTCATG 180096
Query 213825 AACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCA 213884
|| ||||| || | |||||| ||| ||| || || | | | ||| ||| ||
Sbjct 180097 AAGAGGTCAGGAATCCACAGAGCGTAGAAGAGATCGCGAGCGCGGACCTCCTCCTTGCCG 180156
Query 213885 GAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATG 213944
||| |||||||| || || ||| |||||| ||| |||||||| ||||| | |||||||
Sbjct 180157 TGGTTCTTGCGCAGGTCAAGGAAGCCAAAGACGTCAGCGTGCCATGGCTCGAGGTAGATG 180216
Query 213945 GCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCA----TGTT 213997
|| ||||| || | || | ||||| |||||||| | | | || | || ||||
Sbjct 180217 GCGAAGGCACCTGGACGCTTGTTGCCACCCTGGTCGA----CATAGCGAGCAGTGTTGTT 180272
Query 213998 GAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGA 214057
| | | || || | ||| | || || || || |||||| || || | || || ||
Sbjct 180273 GTATACACGGAGCATGGGAATGAGACCATTAGATGTTCCGTTAGTGCCACCGATGTATGA 180332
Query 214058 GCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCAT 214117
||| | || | | | | || | ||| || || || || ||| |||||||||||
Sbjct 180333 GCCAGTAGCACGAATGCGGTGCACGTTGAGGCCAATACCGCCAGCGGTCTTGGAGATCAA 180392
Query 214118 GGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162
|| ||| | | | || || |||||| | |||||||| ||
Sbjct 180393 CGCACAGGTCTTGAGTGTGTCGTAAATGCCGTCGATGCTGTCCTC 180437
>seq23
Length=86929
Score = 271 bits (300), Expect = 1e-67
Identities = 577/851 (68%), Gaps = 28/851 (3%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||||||||| || || | ||||| |||||||| ||||| || ||| || ||||||||
Sbjct 34488 CTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTACCAGCCAGAGAAATGTTCTC 34547
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTC 47952
||||||| ||||||||||| | || || ||| ||| | ||| ||| |
Sbjct 34548 CATGAAGTCGAAGGGGTTGGTGGCGTGGTAGACCTTGACGTTGCCGAGGGCCAAC----- 34602
Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012
||||| | || |||||| |||||||||||| ||||||| || ||||||||| |
Sbjct 34603 -AGCAGACGGTCAGCGACGAACTCGATGTATTGGCACATGAGAGTAGCGTTCATGCCGAG 34661
Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072
|| | || | || | | | ||||||| ||| |||| |||||||| |
Sbjct 34662 CAGAGCGCATGGTAGTGCGTCGCTCAAGAACTCCTGCTCAATCTCGACGGCTTCAGTGAT 34721
Query 48073 AATCTGCT-TAACGCGGGACTCTGAG---GGTTTGTTGCGCAGGTGCTTGGCATAGAGCA 48128
|| ||| | || ||||||| | || ||||| ||| | | |||| |
Sbjct 34722 GATA-GCTCTGACA---GACTCTGGGCTGGGCTTGTTCTCGAGGAGAGAGA---AGAGAA 34774
Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188
|||||| ||||| |||||| ||| ||||| || ||||||| |||||||||| |
Sbjct 34775 GGCAGGCGAAGTCGGTGTGCATGCCCTCGTCACGAGAGATGAGCTCGTTGGAGAATGTTA 34834
Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248
|||| ||||| | || | || ||||||||||| || | |||||||| || |||||
Sbjct 34835 GACCGGGCATCAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAACCGCTGAAGA 34894
Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308
|||| ||||| || || ||||| || ||| | | |||| | | ||||||||| |
Sbjct 34895 AGATACCCTCAACAGCGGCGAATGCAACGAGGCGGTTGGCGAATGTGGAGTTCTTGTCGG 34954
Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368
||||||| || |||||||| |||||||| |||||| || || | || |||||
Sbjct 34955 AGATCCATCGCAGGGCCCAGTCGGCCTTCTTGCGGATGCAGGGGATGTTGTCGATGGCGT 35014
Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGC-AACATAGGTAGTGAGCAGCTTTGCGTAC 48427
|||||| | | ||| || | || | ||| || || || || ||| | |||
Sbjct 35015 TGAAGAGGTACCTGCGCT-GCTTGGGCTCGCTAATGTATGTGTCGATGAGCAGAGAGTAG 35073
Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487
|||| ||||| || ||||| || ||| ||||| ||||||||| | |||||
Sbjct 35074 GTCTCTGAGTGAACGTTCTCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCGGGG 35133
Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547
| || ||||| | ||||||| ||| | || ||||| ||||| || ||||| || ||
Sbjct 35134 ATTTGTACTTCGCTAGAGAATCGCTCAACAAGGTTCTCGTTGACAATGCCATCGGAGGCT 35193
Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA-GC--ATTC 48604
|| |||||||| ||||| || | ||| |||||||| | | ||||| || |||
Sbjct 35194 GCGAAGAAGGCGAGGACGTGGGAGATGAAGAAGCGCTCGTCATCGTTGAGACGCTTGTTC 35253
Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664
||| | || | ||| ||| ||||| | || || | |||||||| || || ||
Sbjct 35254 CAGTCGTGAAGGTCCTTGGAGAGGTCGATCTCCTCTGCGGTCCAGAAAGAAGCCTCGGCC 35313
Query 48665 TTTTTGTACAT 48675
|| ||||||||
Sbjct 35314 TTCTTGTACAT 35324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931526430644480
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