Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01] 547 sequences; 33,016,309 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq527 91.5 1e-12 >seq527 Length=259400 Score = 91.5 bits (100), Expect = 1e-12 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 435127 CCTTTTGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATT 435186 |||| ||||| |||||||| | |||||||||||||||||| | ||| ||||||| | Sbjct 132487 CCTTCGGAATTCTTCTTCCACGCCATGGCTGGTCGTGAAGGTTTGATTGATACAGCAGTC 132428 Query 435187 AAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTA 435244 || ||||| || |||||||| || ||| | || |||||| ||| |||||| ||| Sbjct 132427 AAGACTGCCGAGACTGGTTACATCCAACGTCGTCTCGTCAAGGCGCTCGAAGATGTTA 132370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740603544611622