Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01]
547 sequences; 33,016,309 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq530 123 2e-23
>seq530
Length=496674
Score = 123 bits (136), Expect = 2e-23
Identities = 167/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||||| || || ||| ||| ||||| |||||||| |||||
Sbjct 171276 ACCACCACGGAGACGAAGCACCAAGTGAAGTGTGGACTCCTTTTGGATGTTGTAGTCGGA 171217
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| || || |||| ||||| || |||||||| || || | |||||| || || | ||
Sbjct 171216 GAGAGTACGGCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGACGCTGTTGGTCCGGAGG 171157
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| ||| || ||||| || ||| || | | | |||| ||||||||||||||||
Sbjct 171156 AATACCCTCCTTGTCTTGGATCTTCGACTTGA-CGTTGTCAATAGTGTCGCTTGATTCCA 171098
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | |||||| || || || || | || || || ||||| ||||||
Sbjct 171097 CCTCGAGCGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCATA 171048
Score = 89.7 bits (98), Expect = 3e-13
Identities = 152/218 (70%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
||| | |||||| || ||||| ||| || || |||||||| || ||||| || || |
Sbjct 171492 ACGGAGCACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGCGTTCGGCC 171433
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
||| |||| || || || || || || | ||||||||| || | || | ||| || ||
Sbjct 171432 GTCTTCCAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTT 171373
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
||| || || || | ||| ||| | |||||||| || || || || | || |
Sbjct 171372 GTCCTGGATCTTGGACTTTA-CATTGTCGATCGTGTCGCTAGACTCGACTTCCAATGTAA 171314
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || || || || | || || |||||||||||||||
Sbjct 171313 TGGTCTTTCCGGTAAGAGTCTTGACAAAGATCTGCATA 171276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328701808674240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |