Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01]
547 sequences; 33,016,309 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq23 107 6e-18
>seq23
Length=86929
Score = 107 bits (118), Expect = 6e-18
Identities = 361/547 (66%), Gaps = 29/547 (5%)
Strand=Plus/Minus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| |||||| |||||||| || |||||||||||| | ||| |||||| | || ||
Sbjct 35300 TTCTGGACCGCAGAGGAGATCGACCTCTCCAAGGACCTTCACGACTGGAACAAGCGTCTC 35241
Query 443397 TCTAGCCATGAAC-GCGATTTCTTCAAATGCA---TCTTGGCCTTCTTTGCACCGAGCGA 443452
| | |||| ||| || ||||| | | || | |||||||| ||| | |||
Sbjct 35240 ---AACGATGACGAGCGCTT-CTTCATCTCCCACGTCCTCGCCTTCTTCGCAGCCTCCGA 35185
Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTA---CGAAATGGTAGTGTACACCGA 443509
|| || ||| ||||| || || ||| |||| |||| | | | | ||||
Sbjct 35184 TGGCATTGTCAACGAGAACCTTGTTGAGCGATTCTCTAGCGAAGTACAAAT---CCCCGA 35128
Query 443510 GGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAG 443569
||| || | |||||||| |||||| | ||||||||| ||||| | ||| ||||
Sbjct 35127 GGCACGATGCTTCTACGGTTTCCAAATCATGATGGAGAACGTTCACTCAGAGACCTACTC 35068
Query 443570 TCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCG---GTCCATCTTCTCATC 443626
|| | | ||| | ||| ||| | ||| | | ||||| || | ||||| | |
Sbjct 35067 TCTGCTCATCGACACATACATT---AGCGAGCCCAAGCAGCGCAGGTACCTCTTC--AAC 35013
Query 443627 GTTCAT-GACCACG--CCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGA 443683
| ||| ||| || || ||||| | ||| | |||||| | ||| ||
Sbjct 35012 GC-CATCGACAACATCCCCTGCATCCGCAAGAAGGCCGACTGGGCCCTGCGATGGATCTC 34954
Query 443684 ACGAGAAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGT 443742
||| || | ||| | |||| | | || || || || || || | || || || | |
Sbjct 34953 -CGACAAGAACTCCACATTCGCCAACCGCCTCGTTGCATTCGCCGCTGTTGAGGGTATCT 34895
Query 443743 TGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGT 443802
| || ||||| |||| ||||||||||||||| | || ||||| || || |||| ||||
Sbjct 34894 TCTTCAGCGGTT-CTTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGTCTGATGCCCGGT 34836
Query 443803 CTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGT 443862
|| || || ||||| || ||| ||| |||||||| |||| ||||||||||||
Sbjct 34835 CTAACATTCTCCAACGAGCTCATCTCTCGTGACGAGGGCATGCACACCGACTTCGCCTGC 34776
Query 443863 CTTCTCT 443869
|||||||
Sbjct 34775 CTTCTCT 34769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588324868246415
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |