Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Alternaria_20alternata_20[genbank_20GCA_5F001696825.1_202016-08-01] 547 sequences; 33,016,309 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq504 89.7 4e-13 >seq504 Length=802703 Score = 89.7 bits (98), Expect = 4e-13 Identities = 164/237 (69%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 30223 CATGTCCGT-GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30281 ||||||| | |||||| || || ||||||| ||||||||| ||||| || || ||||| | Sbjct 590145 CATGTCCCTTGTACTCGGCGCCAAAATGCCGCCACTGGAAGCCGTATACTGGACCCAGCT 590086 Query 30282 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30341 | || || || ||| | | |||| |||||| | | || | |||||| ||| Sbjct 590085 CGCCTTCCTCGTAGTGGTTTAGGCCCACCTTGTCGAGGTACTCCCGACTGCCGTTGCCGT 590026 Query 30342 CCCAGATCTT--TACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAA 30399 |||||||||| |||| | || |||||| ||| || |||| ||| ||| || Sbjct 590025 CCCAGATCTTGATACCAGCGTCCGAGAGAGAC--TTGCTGTGTGTGCTGCCTGCGACAAA 589968 Query 30400 CCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 ||| |||| ||| | | ||||| ||| || || || || ||||||||||| Sbjct 589967 CCATAGCAACTCGCCAATTACGGCACGAGTAAATACTCTTTTTGTTGTGAGGAGGGG 589911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406307691306324