Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2473 116 8e-21 seq315 93.3 9e-14 seq2845 91.5 3e-13 seq1704 84.2 5e-11 >seq2473 Length=337605 Score = 116 bits (128), Expect = 8e-21 Identities = 177/252 (70%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 || || ||||| |||||||||| || ||||| ||| | || || | || ||| Sbjct 140369 ATTATCACAGAGGCAGTTGAAATTGAGAAGGAATTCTTGACCGATGCCCTCCCTTGTGCT 140428 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || |||| |||||| | | || ||| | || |||||||| ||||| |||||||| | Sbjct 140429 CTGCTTGGAATGAACTCCAAGCTCATGTGTCAATACATCGAGTTCGTTGCCGACCGGTTG 140488 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 |||| || ||||| || | || | || || | | ||||| || | |||||||| Sbjct 140489 CTTGTGGCTCTTGGCAACAAAAAGTTCTATAATGCCACTAACCCATTCGACTTTATGGAC 140548 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 || ||||| || |||||||||||||| || |||||||| |||| || |||| | Sbjct 140549 AATATCTCGCTGGCTGGTAAGACCAACTTCTTTGAGAAGCGTGTTGGTGATTACCAGAAG 140608 Query 230626 CCTGGTGTGATG 230637 ||||||| ||| Sbjct 140609 GCTGGTGTTATG 140620 >seq315 Length=118163 Score = 93.3 bits (102), Expect = 9e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 319451 GTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAA 319510 ||||||||||| ||| ||||| || |||| ||||| || || ||||| |||| Sbjct 52093 GTTCGTAATGGTATATATCCGTGCATACTTCGTCCAGGAAGCCAGAATCGTGACTGACAA 52034 Query 319511 TCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACA 319570 ||| || | | || || | | | |||||||| | |||| ||||||| | | Sbjct 52033 TCAAGCTAGTTATTTCTGTATGCTGTTTGAGGTATTCTTCGAGCCACTTCACGTTGGCGA 51974 Query 319571 CAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCAC 319630 || | ||||| ||||| ||||||||||| || | | || |||| | |||||||| Sbjct 51973 CATCCAAGTGGTTAGTCGGTTCGTCAAGAAGGAGAACATCGGCCTTCATAATCATTGCAC 51914 Query 319631 GTGCAAGAGCGAGTTTCATTTTCCACCCTCCGGA 319664 ||||||| || | ||||| |||||||| || || Sbjct 51913 GTGCAAGCGCTAACTTCATCTTCCACCCGCCAGA 51880 >seq2845 Length=6650 Score = 91.5 bits (100), Expect = 3e-13 Identities = 197/292 (67%), Gaps = 6/292 (2%) Strand=Plus/Minus Query 292109 ATCACTTCCTTGCGAGTCTCATTTGATTCTACAATTGCTCCGATGATATCTTGAGGCACT 292168 || || |||||||| || ||| || | || | || ||||| | | | || ||||| Sbjct 4175 ATGACGTCCTTGCGCGTGGAATTCGAGGCGACCACCGCACCGATCAAAGCCTGCGGCACG 4116 Query 292169 CCCTCGAAATTAGCCAGCAGTTGCTTCGTATCCTTTGGAAAGCAATAAGCTCCATAACCG 292228 | | ||| | ||||||||| |||| ||||| || | ||| || | || ||||| Sbjct 4115 TCGCGGTAATCGGACAGCAGTTGGCTCGTGTCCTTGGGCAGGCAGTAGCCACCGAAACCG 4056 Query 292229 AACGAAGGGTT--TG-AGTACCCCTGACCAATGCGAGGCTCCAGAGTCACACCATCAATG 292285 ||||| || || || ||||| | || || || || ||||| ||| || || | | Sbjct 4055 AACGAGGGATTGTTGTAGTACGCG---CCGATCCGCGGGTCCAGGCACACGCCGTCGACG 3999 Query 292286 ATTTCTTTCGCATTCATACCGTGAGACATTGCGAATGTATCTAGTTCGTTGAAGTATGCA 292345 || | ||| | | || | | || || || | || ||||| |||||| | ||| Sbjct 3998 ATCTGCCGCGCGTCGAGGCCACGGGCCAGGGCAAACGAGTCCAGTTCATTGAAGAAGGCA 3939 Query 292346 ACTCGCATTGCAAGATACGTGTTAGAGAATAGTTTGACGGCCTCGGCTTCGC 292397 || ||||| || || || ||||| | ||| || |||| |||||||||||||| Sbjct 3938 ACCCGCATCGCCAGGTAGGTGTTCGCGAACAGCTTGATGGCCTCGGCTTCGC 3887 >seq1704 Length=8202 Score = 84.2 bits (92), Expect = 5e-11 Identities = 191/285 (67%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 292115 TCCTTGCGAGTCTCATTTGATTCTACAATTGCTCCGATGATATCTTGAGGCACTCCCTCG 292174 |||||||| || ||| | || || || || | ||| | | || ||||| || Sbjct 4889 TCCTTGCGGGTGCGATTGGCATCGACGATCGCGCGGATCAGGTTCTGCGGCACCTCCGAA 4830 Query 292175 AAATTAGCCAGCAGTTGCTTCGTATCCTTTGGAAAGCAATAAGCTCCATAACCGAACGAA 292234 |||| || || || ||||| |||||||| || | |||||| | || || ||||| | Sbjct 4829 TAATTGGCGAGGAGCTGCTTGGTATCCTTGGGCAGGCAATAGCCGCCGTAGCCGAA-GCT 4771 Query 292235 GGGTTTGA-GTACCCCTGACCAATGCGAGGCTCCAGAGTCACACCATCAATGATTTCTTT 292293 ||| ||| ||| || || ||||| || || || || ||||| ||||| | Sbjct 4770 GGGATTGTTGTAATGCTTGCCGATGCGCGGATCGAGGCCGACGCCATCGATGATCTGGCG 4711 Query 292294 CGCATTCATACCGTGAGACATTGCGAATGTATCTAGTTCGTTGAAGTATGCAACTCGCAT 292353 || | ||| || | || ||| | | || |||||||||||| | ||||| ||||| Sbjct 4710 CGTGTCCATGCCACCGGCGATGGCGTAGCTGTCGAGTTCGTTGAAGAAAGCAACGCGCAT 4651 Query 292354 TGCAAGATACGTGTTAGAGAATAGTTTGACGGCCTCGGCTTCGCG 292398 || ||||| || || | ||| || |||| ||||| || ||||| Sbjct 4650 CGCGAGATAGGTATTGGCGAACAGCTTGATCGCCTCCGCCTCGCG 4606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057782323387250