Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2473 100 3e-16 >seq2473 Length=337605 Score = 100 bits (110), Expect = 3e-16 Identities = 197/288 (68%), Gaps = 5/288 (2%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || ||||| || ||||| || ||| | ||||| || || |||||||| ||||| Sbjct 139983 ATGTACGTGTCAATGAGGAGAGAGTATGTCTCGGAATGGATATTCTCCATCATGATCTGG 139924 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 |||||||||||||| || || || | || |||||||| || ||||| || | ||| Sbjct 139923 AATCCGTAAAAGCAACGAGCCTCTGGAATCTGAACTTCAGCGCTGAATCTCTCGACAAGA 139864 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || || || |||||||| ||| |||||||| || |||| | | ||||| || Sbjct 139863 TTCTCATTGACGATGCCATCGGAGGCGGCGAAGAAGGCCAGGACGCGAGAGATGAAGTAG 139804 Query 17414 TTTTCGTC--CGGT--GTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTC 17469 ||| || || | || || | |||||| | | ||||||||| | ||| | ||| Sbjct 139803 CGTTCATCGTCGTTCAGT-CGATGGTTCCAGTCATGGAGATCTTTGGACAAATCGATTTC 139745 Query 17470 TTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 ||| | ||||| || || | || ||||| ||||| | |||||| Sbjct 139744 TTCAGCAGTCCAGAAGGATGCTTCGGCTTTTTTGTACATTTGCCAAAT 139697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517525706841000