Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2550 250 3e-61 seq2473 111 2e-19 >seq2550 Length=338734 Score = 250 bits (276), Expect = 3e-61 Identities = 596/897 (66%), Gaps = 8/897 (1%) Strand=Plus/Plus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||||||||| || | |||| |||| || || |||| |||||| | ||| | | Sbjct 314554 TCAAACTCGTCACCATAGACATCAGCCAACCCTGGCGCCTCATTCGGACAGAACAAGGTC 314613 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 || || |||| | || ||||||||||| || | ||| || |||||||||| | || Sbjct 314614 CAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTCCAAAGAGCAAGGAAG 314673 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 ||||| | || ||| ||| || ||||| ||||| |||||| || || | | Sbjct 314674 AGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGATCCAGAAATTCAAAG 314733 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 ||||| |||||||| ||||| | ||| || | | | || ||||||||||| || || Sbjct 314734 ATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCACCT 314793 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 ||||| | ||||| |||||| || ||| | || | | ||| || ||||| ||||| || Sbjct 314794 TGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATTAGAA 314853 Query 54251 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 54310 | ||||| || || | |||||| ||| |||| || ||| | | ||||| Sbjct 314854 GAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACGTTAAGACCA 314913 Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370 || || || || | || || || | || || || | ||||| || ||||| || Sbjct 314914 ATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCG 314973 Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430 || ||||| ||| |||| | | |||||||| || |||||| | | |||||| Sbjct 314974 ATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCGTTCCC 315033 Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490 || || || | ||| || ||||| || || || |||| | || | | ||| || ||| Sbjct 315034 GCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTC 315093 Query 54491 TCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 54550 || || || || |||||| | ||||||||| ||||| |||||||| | |||||| Sbjct 315094 TCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCATGTGT 315153 Query 54551 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTA 54610 || || | ||| | | ||| ||| ||| || || || || | || | || || Sbjct 315154 TGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCTCTCTAGTGTCTTG 315213 Query 54611 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCC 54670 || |||||||| | ||| ||| || || || || | ||| | ||||| |||| || Sbjct 315214 AATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATGGCCGAGTTAAGTTCCTCA 315273 Query 54671 TTATATTTGTTAACTACATCCATGGTAATACTTGAAATAAT---CGGAGAATGTTTCCCA 54727 || ||| |||| | || ||| | ||||| || || || | | || Sbjct 315274 GCATGTTTCATAACAATTTCATAGGTTTTGTGAGAAATCATGGGCGCAGGACGGTT---G 315330 Query 54728 TTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTA-AATAGtttttttGT 54786 ||||| || ||| ||| | | | || | || || || | ||| | || || || Sbjct 315331 TTTTTTGGGTTGGTATAATGGTAAAGGTCGTCAATAAC-GGACGAGAATTGCTTCTTCGT 315389 Query 54787 TTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 | ||| || || || |||||||||||||| || || ||||| || ||||| ||||| Sbjct 315390 CTGTTTATGCAGGTTCGATACGGCTATTCTGGCAGCAAGAATCGCGTAATCAGGATG 315446 >seq2473 Length=337605 Score = 111 bits (122), Expect = 2e-19 Identities = 301/456 (66%), Gaps = 6/456 (1%) Strand=Plus/Minus Query 23828 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 23887 || |||||| || || ||||| ||||| ||||| || || || || || || ||||| Sbjct 140623 AGCCATAACACCAGCCTTCTGGTAATCACCAACACGCTTCTCAAAGAAGTTGGTCTTACC 140564 Query 23888 TTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAA 23947 | | || ||||| ||||| || ||| |||| || || ||||||||| ||||| Sbjct 140563 AGCCAGCGAGATATTGTCCATAAAGTCGAATGGGTTAGTGGCATTATAGAA-CTTTTTGT 140505 Query 23948 TCCCAATTCAGA-AATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCAC 24006 | |||| | || ||| | || || || ||||| || ||| ||| | | Sbjct 140504 TGCCAAGAGCCACAAGCAACCGGTCGGCAACGAACTCGATGTATTGACACATGAGCTTGG 140445 Query 24007 AATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGA 24066 | |||||||| | || | || || || | || | ||||| | ||||| | Sbjct 140444 AGTTCATTCCAAGCAGAGCACAAGGGAGGGCATCGGTCAAGAATTCCTTCTCAATTTCAA 140385 Query 24067 CCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTT-- 24124 | || ||||| ||||| | | || | | ||| || ||| || |||| Sbjct 140384 CTGCCTCTGTGATAATGGCTTCAACGGCCTGGGGACTGGGCCGATG--ATGCATGTGAGA 140327 Query 24125 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 24184 ||||| || || || || || ||| |||||||| || | | || |||||||| || Sbjct 140326 AAACAGCAGGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATCAATTCGTTCGA 140267 Query 24185 AAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCC 24244 ||| || || || ||||| || || ||||| || ||||| || ||||| || || || || Sbjct 140266 AAAGGTAAGACCAGGCATAAGACCGCGCTTCTTTAGCCAGAAAATGGAAGCGAAGGAGCC 140207 Query 24245 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAAT 24280 ||||||||||| || || || ||||||||||| Sbjct 140206 GCTGAAGAAAATTCCCTCGACAGCAGCAAAGGCAAT 140171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593698778826000