Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03]
3,075 sequences; 30,376,016 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq2726 116 3e-21
seq1061 102 7e-17
seq2257 98.7 9e-16
>seq2726
Length=527079
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || ||||||||||||||||| | || ||||| |||||||| ||||||
Sbjct 136280 TACCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGG 136339
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || || ||| || ||||| ||||| || |||| || || ||||| || || |
Sbjct 136340 AAAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTG 136399
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || || || ||| ||| ||| ||||| | |||| ||||||| ||| |
Sbjct 136400 GAATACCTTCTTTATCTTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAA 136459
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | || | |||||| || || || ||||| || |||||||||||
Sbjct 136460 CTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | |||||||| || ||||||||||| || | || || ||| ||
Sbjct 137057 ACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCATCTTCA 137116
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|||||||| ||||| |||| | || ||||| || ||||| |||||||||||||||
Sbjct 137117 AGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGG 137176
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | || | ||||| | ||| ||||||| ||| | || ||
Sbjct 137177 ATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACCTCGAGGGTGATGGTCTTT 137236
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|| ||||| || || || || ||||||||||
Sbjct 137237 CCCGTCAGGGTCTTGACGAAGATCTGCATGG 137267
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| |||||||||||||| |||||||| | || || |||||| || || |||||
Sbjct 136540 GTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCAAGTTGCTTTCCG 136599
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| | || | ||| || ||||| || || || || ||||| ||| |||||| |||
Sbjct 136600 GCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGAATTTTGGTTTTT 136659
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | | || || || | || | |||||||||||||| |||
Sbjct 136660 ACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTGCCGGTCAGGGTT 136719
Query 118722 TTTACAAAAATCTGCAT 118738
|| || ||||| |||||
Sbjct 136720 TTCACGAAAATTTGCAT 136736
Score = 86.0 bits (94), Expect = 5e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
||||| || ||||||||||| ||||| | |||||| ||||||||||| || ||
Sbjct 136768 GTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 136827
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || | ||| ||||| || ||||| ||||| |||||||| ||| || ||
Sbjct 136828 GCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGTCTTC 136887
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| || || | ||| ||||| | ||| | || || ||||| |||||
Sbjct 136888 ACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTC 136947
Query 118722 TTTAC 118726
|| ||
Sbjct 136948 TTGAC 136952
>seq1061
Length=321426
Score = 102 bits (112), Expect = 7e-17
Identities = 86/106 (81%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || |||||||||||||| | |||||| ||||||||||| || |||
Sbjct 107744 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCGAGCTGCTTACCA 107803
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||| |||| ||||||||||| || || || ||||||||||||||||
Sbjct 107804 GCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTG 107849
>seq2257
Length=132105
Score = 98.7 bits (108), Expect = 9e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
||||| || || |||||||||| ||| || || |||||||| ||||| ||| ||||
Sbjct 93797 TTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 93738
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
| || |||||||| || || ||||||||||||||| ||| || || || | |||
Sbjct 93737 AATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCG 93678
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||| | ||| ||||| | ||| | || |||||||| || || || || ||
Sbjct 93677 ATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGAA 93619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433814141527900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |