Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2726 116 3e-21 seq1061 102 7e-17 seq2257 98.7 9e-16 >seq2726 Length=527079 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || || ||||||||||||||||| | || ||||| |||||||| |||||| Sbjct 136280 TACCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGG 136339 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | || || ||| || ||||| ||||| || |||| || || ||||| || || | Sbjct 136340 AAAGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTG 136399 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || ||| ||| ||| ||||| | |||| ||||||| ||| | Sbjct 136400 GAATACCTTCTTTATCTTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAA 136459 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | |||||| || || || ||||| || ||||||||||| Sbjct 136460 CTTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCAT 136508 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | |||||||| || ||||||||||| || | || || ||| || Sbjct 137057 ACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTTCGACCATCTTCA 137116 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| ||||| |||| | || ||||| || ||||| ||||||||||||||| Sbjct 137117 AGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCTTGG 137176 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | ||||| | ||| ||||||| ||| | || || Sbjct 137177 ATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCACCTCGAGGGTGATGGTCTTT 137236 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740 || ||||| || || || || |||||||||| Sbjct 137237 CCCGTCAGGGTCTTGACGAAGATCTGCATGG 137267 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||||||||| |||||||| | || || |||||| || || ||||| Sbjct 136540 GTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCAAGTTGCTTTCCG 136599 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || | ||| || ||||| || || || || ||||| ||| |||||| ||| Sbjct 136600 GCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGAATTTTGGTTTTT 136659 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||||| | | || || || | || | |||||||||||||| ||| Sbjct 136660 ACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTGCCGGTCAGGGTT 136719 Query 118722 TTTACAAAAATCTGCAT 118738 || || ||||| ||||| Sbjct 136720 TTCACGAAAATTTGCAT 136736 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || ||||||||||| ||||| | |||||| ||||||||||| || || Sbjct 136768 GTAGATTCCTTTTGAATGTTATAATCAGAGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCG 136827 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || | ||| ||||| || ||||| ||||| |||||||| ||| || || Sbjct 136828 GCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGGTCTTC 136887 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| || || | ||| ||||| | ||| | || || ||||| ||||| Sbjct 136888 ACGTTGTCGATAGTATCAGATGACTCCACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTC 136947 Query 118722 TTTAC 118726 || || Sbjct 136948 TTGAC 136952 >seq1061 Length=321426 Score = 102 bits (112), Expect = 7e-17 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || |||||||||||||| | |||||| ||||||||||| || ||| Sbjct 107744 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCGAGCTGCTTACCA 107803 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||| |||| ||||||||||| || || || |||||||||||||||| Sbjct 107804 GCGAAGATAAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTG 107849 >seq2257 Length=132105 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 ||||| || || |||||||||| ||| || || |||||||| ||||| ||| |||| Sbjct 93797 TTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 93738 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 | || |||||||| || || ||||||||||||||| ||| || || || | ||| Sbjct 93737 AATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTCTTGAATCTTGCTCTTCACATTGTCG 93678 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | ||||| | ||| ||||| | ||| | || |||||||| || || || || || Sbjct 93677 ATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGAA 93619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433814141527900