Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq2726 87.8 3e-12 >seq2726 Length=527079 Score = 87.8 bits (96), Expect = 3e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 146080 AGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCC 146139 ||| || ||||| ||||| ||||| || || || | || ||| || | ||| ||||| Sbjct 136539 AGTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCAAGTTGCTTTCC 136598 Query 146140 AGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 ||||||||||| | ||| ||||| || ||||||||||| |||||||| Sbjct 136599 GGCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTG 136646 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | | ||| || ||||| || | ||| |||||| || |||||||| ||| Sbjct 136282 CCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAA 136341 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | || ||| || | || ||||| ||||| || | || |||||| || || ||| Sbjct 136342 AGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGA 136401 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||||||||| Sbjct 136402 ATACCTTCTTTATCTTG 136418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743497820704000