Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03]
3,075 sequences; 30,376,016 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq2473 123 5e-23
seq2550 93.3 8e-14
>seq2473
Length=337605
Score = 123 bits (136), Expect = 5e-23
Identities = 287/429 (67%), Gaps = 23/429 (5%)
Strand=Plus/Plus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
||||||||||||| || || ||||| ||||| || || | ||||| ||||||||||||
Sbjct 140172 TTGCCTTTGCTGCTGTCGAGGGAATTTTCTTCAGCGGCTCCTTCGCTTCCATTTTCTGGC 140231
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
| ||||| | ||| || |||||||||| |||| || || || || || ||| | || |
Sbjct 140232 TAAAGAAGCGCGGTCTTATGCCTGGTCTTACCTTTTCGAACGAATTGATCTCTCGTGATG 140291
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTG-TTGAAAAAGGGTTTTGTTGATACCCCA 102097
| |||||||| |||||||| ||| ||||| || | | | | | |||
Sbjct 140292 AGGGTCTTCACACTGACTTTGCCTGCCTGCTGTTTTCTCACATGCATCATCG--GCCCAG 140349
Query 102098 TCAAGAGAAAGGATTCTTGAA---ATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154
|| || | ||||| ||| |||| || || || |||||| | |||||
Sbjct 140350 TCCCCAGGCCG-----TTGAAGCCATTATCACAGAGGCAGTTGAAATTGAGAAGGAATTC 140404
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214
| || | | |||| ||| | | | |||||||||| |||| | ||| | || |||
Sbjct 140405 TTGACCGATGCCCTCCCTTGTGCTCTGCTTGGAATGAACTCCAAGCTCATGTGTCAATAC 140464
Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAG------AAAAGCACTAT 102268
|| || || || || | | | ||| ||| ||| || | ||||| ||||
Sbjct 140465 ATCGAGTTCGTTGCCG---ACCGGTTGCTTG---TGGCTCTTGGCAACAAAAAGTTCTAT 140518
Query 102269 AATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTT 102328
|||| || ||||| ||| || ||||||||||| || || | ||||||||||||
Sbjct 140519 AATGCCACTAACCCATTCGACTTTATGGACAATATCTCGCTGGCTGGTAAGACCAACTTC 140578
Query 102329 TTTGAAAAG 102337
||||| |||
Sbjct 140579 TTTGAGAAG 140587
>seq2550
Length=338734
Score = 93.3 bits (102), Expect = 8e-14
Identities = 172/250 (69%), Gaps = 2/250 (1%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| ||||| |||||||| || | || ||| |||||||| ||||| || || |||
Sbjct 314917 CCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCGATG 314976
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACA 94910
||||| || | | | | ||| || || || | | ||| || || | | |||||
Sbjct 314977 CTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGC-GTTCCCGC 315035
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|| || || ||||| |||||||| || ||| | | | ||||| | || ||| || ||
Sbjct 315036 GTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTCTC 315095
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030
|||| | | || || ||| ||||| || || || |||||||||||||||| ||
Sbjct 315096 AATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCATGTGTTG 315155
Query 95031 AGGGCGCTCA 95040
|||||||||
Sbjct 315156 CGGGCGCTCA 315165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989545011936625
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |