Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq2550 241 2e-58 seq2473 116 5e-21 >seq2550 Length=338734 Score = 241 bits (266), Expect = 2e-58 Identities = 594/897 (66%), Gaps = 8/897 (1%) Strand=Plus/Plus Query 63189 TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGAC 63248 || |||||||| || | |||| |||| | || |||| |||||| | ||| | | Sbjct 314554 TCAAACTCGTCACCATAGACATCAGCCAACCCTGGCGCCTCATTCGGACAGAACAAGGTC 314613 Query 63249 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63308 || || |||| | || ||||||||||| || | ||| || |||||||||| | || Sbjct 314614 CAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTCCAAAGAGCAAGGAAG 314673 Query 63309 AGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63368 ||||| | | ||| ||| || ||||| ||||| |||||| || || | | Sbjct 314674 AGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGATCCAGAAATTCAAAG 314733 Query 63369 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63428 ||||| |||||||| ||||| | ||| || || | | || ||||||||||| || || Sbjct 314734 ATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCACCT 314793 Query 63429 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63488 ||||| | ||||| |||||| || ||| | || | | ||| || ||||| || || || Sbjct 314794 TGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATTAGAA 314853 Query 63489 ATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCT 63548 ||||| || || | |||||| ||| |||| || ||| | | ||||| Sbjct 314854 GAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACGTTAAGACCA 314913 Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608 || || || || | || || || | || || || | || || || ||||| || Sbjct 314914 ATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCG 314973 Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668 |||||||| || |||| | | |||||||| || |||||| | | | |||||| Sbjct 314974 ATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCGTTCCC 315033 Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728 || || || | ||| || ||||| || || || |||| | || | | ||| || ||| Sbjct 315034 GCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTC 315093 Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788 ||||| || || |||||| | ||||||||| ||||| |||||||| | |||||| Sbjct 315094 TCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCATGTGT 315153 Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848 || || | ||| ||| |||| ||| ||| | || || || | || | || || Sbjct 315154 TGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCTCTCTAGTGTCTTG 315213 Query 63849 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCC 63908 || |||||||| | ||| ||| || || || || | ||| |||| || || | || Sbjct 315214 AATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATGGCCGAGTTAAGTTCCTCA 315273 Query 63909 TTATATTTGTTAACTATATCCATGGTAATACTTGAAATAAT---CGGAGAATGTTTCCCA 63965 || ||| |||| || || ||| | ||||| || || || | | || Sbjct 315274 GCATGTTTCATAACAATTTCATAGGTTTTGTGAGAAATCATGGGCGCAGGACGGTT---G 315330 Query 63966 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGT 64024 ||||| || || ||| | | | | || || || || || | ||| | || || || Sbjct 315331 TTTTTTGGGTTGGTATAATGGTAAAGGTCGTCAATAAC-GGACGAGAATTGCTTCTTCGT 315389 Query 64025 TTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 | || || || || |||| |||||||||||| || ||||| || ||||| ||||| Sbjct 315390 CTGTTTATGCAGGTTCGATACGGCTATTCTGGCAGCAAGAATCGCGTAATCAGGATG 315446 >seq2473 Length=337605 Score = 116 bits (128), Expect = 5e-21 Identities = 300/455 (66%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 33275 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCC 33334 || |||||| || || ||||| ||||| ||||| || || || || || || || || Sbjct 140623 AGCCATAACACCAGCCTTCTGGTAATCACCAACACGCTTCTCAAAGAAGTTGGTCTTACC 140564 Query 33335 TTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAA 33394 ||| || ||||| ||||| || || || || || || |||| || | ||||| Sbjct 140563 AGCCAGCGAGATATTGTCCATAAAGTCGAATGGGTTAGTGGCATTATAGAACTTTTTGTT 140504 Query 33395 TCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACA 33454 || | | || ||| | || || ||||| || || ||| ||| | | | Sbjct 140503 GCCAAGAGCCACAAGCAACCGGTCGGCAACGAACTCGATGTATTGACACATGAGCTTGGA 140444 Query 33455 ATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATAC 33514 |||||||| | || | || || || | || | ||||| | ||||| || Sbjct 140443 GTTCATTCCAAGCAGAGCACAAGGGAGGGCATCGGTCAAGAATTCCTTCTCAATTTCAAC 140384 Query 33515 CGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTT--A 33572 || | ||| ||||| | ||||| | ||| || |||| || |||| | Sbjct 140383 TGCCTCTGTGATAATGGCTTCAACGGCCTGGGGACTGGGCCGATG--ATGCATGTGAGAA 140326 Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || || || || || ||| |||||||| || | | || |||||||| ||| Sbjct 140325 AACAGCAGGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATCAATTCGTTCGAA 140266 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || || || || ||||| || || ||||| || ||||| || ||||||||||| || ||| Sbjct 140265 AAGGTAAGACCAGGCATAAGACCGCGCTTCTTTAGCCAGAAAATGGAAGCGAAGGAGCCG 140206 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAAT 33727 ||||| ||||| || || |||||||||||||| Sbjct 140205 CTGAAGAAAATTCCCTCGACAGCAGCAAAGGCAAT 140171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629793391386000