Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq2550 87.8 2e-12 >seq2550 Length=338734 Score = 87.8 bits (96), Expect = 2e-12 Identities = 225/338 (67%), Gaps = 6/338 (2%) Strand=Plus/Plus Query 37129 GGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATAT 37188 ||||| |||||||| || || || | | |||| ||| | || || || || ||| Sbjct 313684 GGATTGACAACCTGGAATTCACCTGCAAGAACTCGTCTAGAGTAAATGTTTGATGTGTAT 313743 Query 37189 GGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCT 37248 ||||||| | || ||| | | || ||| ||| || || ||||| || || Sbjct 313744 GGTTCAAAACATTCGTTAAATCCGAGAATCTGACTTGTGCTGGCTGTTGGCATAGGAGCG 313803 Query 37249 ATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTTTT-AGTTCATTCCAATC 37307 | || | |||||| | || |||||| | ||| ||| |||| || || |||||| Sbjct 313804 ACAAGCAAGCTATTACGCACACCATGTTTTGCAATA-TCTGTTTTGAGCAAATCCCAATC 313862 Query 37308 CCATAAATCTGTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGG 37367 ||| | ||| || || || ||||||||||||||| | || || ||| | || Sbjct 313863 CCAAAGATCAGTAGGCGTCACGTTCCACATATCATATTGCAAAACGCCCTTAGAAACGGG 313922 Query 37368 AGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCA--ACTAGATTCT 37425 ||| | | ||| |||||||| || |||| || ||| ||||| ||||| || | | Sbjct 313923 AGAGCCTTCATAGGTCTCATAGGGACCGTCAACTTTGGCTAGGTCGCAGGACGCGGT--C 313980 Query 37426 AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATT 37463 | ||||| | ||| || |||||||| || || ||||| Sbjct 313981 AAAGCGGCGTGATAAATGGTTTCGAATATCTGGATATT 314018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468506791078000