Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2550 246 4e-60 seq2473 104 3e-17 >seq2550 Length=338734 Score = 246 bits (272), Expect = 4e-60 Identities = 595/897 (66%), Gaps = 8/897 (1%) Strand=Plus/Plus Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041 || |||||||| || | |||| |||| || || |||| |||||| | ||| | | Sbjct 314554 TCAAACTCGTCACCATAGACATCAGCCAACCCTGGCGCCTCATTCGGACAGAACAAGGTC 314613 Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101 || || |||| | || ||||||||||| || | ||| || |||||||||| | || Sbjct 314614 CAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTCCAAAGAGCAAGGAAG 314673 Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161 | ||| | || ||| ||| || ||||| ||||| |||||| || || | | Sbjct 314674 AGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGATCCAGAAATTCAAAG 314733 Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221 ||||| ||||||| ||||| | ||| || || | | || ||||||||||| || || Sbjct 314734 ATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCACCT 314793 Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281 ||||| | ||||| |||||| || ||| | || | | ||| || ||||| ||||| || Sbjct 314794 TGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATTAGAA 314853 Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCT 66341 | ||||| || || | |||||| ||| | || || ||| | | ||||| Sbjct 314854 GAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACGTTAAGACCA 314913 Query 66342 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 66401 || || || || | || || || | || || || | ||||| || ||||| || Sbjct 314914 ATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCG 314973 Query 66402 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 66461 || ||||| ||| |||| | | |||||||| || |||||| | | |||||| Sbjct 314974 ATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCGTTCCC 315033 Query 66462 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 66521 || || || | ||| || ||||| || || || |||| | || | | ||| || ||| Sbjct 315034 GCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTC 315093 Query 66522 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 66581 ||||| || || |||||| | ||||||||| ||||| |||||||| | |||||| Sbjct 315094 TCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCATGTGT 315153 Query 66582 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 66641 || || | ||| | | ||| ||| ||| | || || || | || | || || Sbjct 315154 TGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCTCTCTAGTGTCTTG 315213 Query 66642 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 66701 || |||||||| | ||| ||| || || || || | ||| ||||||| |||| || Sbjct 315214 AATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATGGCCGAGTTAAGTTCCTCA 315273 Query 66702 TTATATTTGTTAACTACATCCATGGTAATACTTGAAATAAT---CGGAGAATGTTTCCCA 66758 || ||| |||| | || ||| | ||||| || || || | | || Sbjct 315274 GCATGTTTCATAACAATTTCATAGGTTTTGTGAGAAATCATGGGCGCAGGACGGTT---G 315330 Query 66759 TTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGT 66817 ||||| || ||| ||| | | | | || || || || || | ||| | || || || Sbjct 315331 TTTTTTGGGTTGGTATAATGGTAAAGGTCGTCAATAAC-GGACGAGAATTGCTTCTTCGT 315389 Query 66818 TTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874 | ||| || || || |||||||||||||| || || | ||| || ||||| ||||| Sbjct 315390 CTGTTTATGCAGGTTCGATACGGCTATTCTGGCAGCAAGAATCGCGTAATCAGGATG 315446 >seq2473 Length=337605 Score = 104 bits (114), Expect = 3e-17 Identities = 297/455 (65%), Gaps = 4/455 (1%) Strand=Plus/Minus Query 35851 AGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACC 35910 || |||||| || || ||||| ||||| ||||| || || || || || || ||||| Sbjct 140623 AGCCATAACACCAGCCTTCTGGTAATCACCAACACGCTTCTCAAAGAAGTTGGTCTTACC 140564 Query 35911 TTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAA 35970 | | || ||||| ||||| || |||||||| || | ||||||| | ||||| Sbjct 140563 AGCCAGCGAGATATTGTCCATAAAGTCGAATGGGTTAGTGGCATTATAGAACTTTTTGTT 140504 Query 35971 TCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACA 36030 || | | || ||| | || || || || || || ||| ||| | | | Sbjct 140503 GCCAAGAGCCACAAGCAACCGGTCGGCAACGAACTCGATGTATTGACACATGAGCTTGGA 140444 Query 36031 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 36090 |||||||| | || | || || || | || | ||||| | ||||| || Sbjct 140443 GTTCATTCCAAGCAGAGCACAAGGGAGGGCATCGGTCAAGAATTCCTTCTCAATTTCAAC 140384 Query 36091 CGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTT--A 36148 || ||||| ||||| | | || | | ||| || ||| || |||| | Sbjct 140383 TGCCTCTGTGATAATGGCTTCAACGGCCTGGGGACTGGGCCGATG--ATGCATGTGAGAA 140326 Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || || || || || ||| |||||||| || | | || |||||||| ||| Sbjct 140325 AACAGCAGGCAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATCAATTCGTTCGAA 140266 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || || || ||||| || || ||||| || ||||| || ||||| || || || || Sbjct 140265 AAGGTAAGACCAGGCATAAGACCGCGCTTCTTTAGCCAGAAAATGGAAGCGAAGGAGCCG 140206 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAAT 36303 ||||||||||| || || || ||||||||||| Sbjct 140205 CTGAAGAAAATTCCCTCGACAGCAGCAAAGGCAAT 140171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658147501483000