Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq2257 116 4e-21 seq2726 111 2e-19 >seq2257 Length=132105 Score = 116 bits (128), Expect = 4e-21 Identities = 142/190 (75%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 139577 TTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATC 139636 ||||| || ||||||||||||| || | |||||||||||| || || || ||||| Sbjct 93797 TTTTGGATATTATAATCGCTCAAAGTACGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATC 93738 Query 139637 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTC 139695 | ||||||||||| || || ||||| || ||||| ||| | || | || | | || Sbjct 93737 AATCGTTGCTGATCTGGGGGGATGCCCTCCTTGTC-TTGAATCTTGCTCTTCACATTGTC 93679 Query 139696 CACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAA 139755 | ||||||| | | ||||||||||| ||| | ||||||||||| | ||| || ||||| Sbjct 93678 GATTGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCGGTGAGCGTCTTGACGAA 93619 Query 139756 --TATTTGCA 139763 |||||||| Sbjct 93618 GCTATTTGCA 93609 >seq2726 Length=527079 Score = 111 bits (122), Expect = 2e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | ||| ||||||| |||||||| || |||||||| || || Sbjct 137039 CCGCCACGGAGGCGAAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAA 137098 Query 139598 ATTGTGCTCGAG--TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 139655 | || |||| ||||| ||||||||||||||| |||||| |||||||| || |||| Sbjct 137099 AGGGT--TCGACCATCTTCAAGCTGTTTACCAGCAAAGATCAAGCGTTGCTGGTCAGGAG 137156 Query 139656 GTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 | ||||| || ||||| ||| || || | | || | ||||| | | ||||| Sbjct 137157 GGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTATCAATAGTGTCACTAGACTCCA 137216 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | ||||| || |||| || || ||||| || ||||| Sbjct 137217 CCTCGAGGGTGATGGTCTTTCCCGTCAGGGTCTTGACGAAGATCTGCAT 137265 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | ||| | |||| ||||| || ||||||||||||||||| Sbjct 136738 CCACCGCGGAGACGAAGAACAAGATGAAGAGTAGATTCCTTTTGAATGTTATAATCAGAG 136797 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || | |||| ||||||||| || ||||| Sbjct 136798 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGA 136857 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||| ||||| ||| | || || || | | || | || || | | |||||| Sbjct 136858 ATGCCTTCCTTGTC-CTGAATCTTGGTCTTCACGTTGTCGATAGTATCAGATGACTCCAC 136916 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATA 139757 ||||| ||| | ||||| ||||| | || || |||| || Sbjct 136917 CTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTGACGACTA 136957 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||||||||| || ||||| | ||| | || || || || || || Sbjct 136540 GTCGACTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCAAGTTGCTTTCCG 136599 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TTT 139686 ||| | |||| |||||| ||||| || || || ||||| || || ||| |||| | ||| Sbjct 136600 GCAAAAATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATC-TTGAATTTTGGTTTT 136658 Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 || | || | |||||||| || || || || | || | || |||||||||| || Sbjct 136659 TACATTGTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTGCCGGTCAGGGT 136718 Query 139747 TTTTACGAATATTTGCATA 139765 ||| ||||| ||||||||| Sbjct 136719 TTTCACGAAAATTTGCATA 136737 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || || | ||| || ||||| | || ||||| ||||||||||||||| Sbjct 136282 CCACCACGCAATCTCAACACCAAGTGCAGAGTGCTTTCTTTCTGAATGTTATAATCGGAA 136341 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| ||||| || || ||| |||| || |||||||| || || || Sbjct 136342 AGCGTCCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGGA 136401 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| | ||||| ||| | | || | |||||| | | ||| || Sbjct 136402 ATACCTTCTTTATC-TTGAATCTTTGTCTTAACATTGTCGATTGTGTCCGATGACTCAAC 136460 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||| || || || | ||||| ||||| || |||||| Sbjct 136461 TTCCAGCGTGATCGTTTTTCCAGTGAGTGTTTTCACGAAAATCTGCATA 136509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496044932540000