Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2550 228 1e-54 >seq2550 Length=338734 Score = 228 bits (252), Expect = 1e-54 Identities = 591/897 (66%), Gaps = 8/897 (1%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 || |||||||| || | ||||| | || || || || | ||||| | ||| | | Sbjct 314554 TCAAACTCGTCACCATAGACATCAGCCAACCCTGGCGCCTCATTCGGACAGAACAAGGTC 314613 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | | || ||||||||||| || | ||| || |||||||||| | || Sbjct 314614 CAATCACCGTTCTTCTCAACTCGTTTCATGAACAAATCTGGGGTCCAAAGAGCAAGGAAG 314673 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 ||||| | || ||| || || ||||| ||||| |||||| || || | | Sbjct 314674 AGATCACGGGCTCTCACTTCTTCCTTTCCGTGGTTCTTGCGAAGATCCAGAAATTCAAAG 314733 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 ||||| |||||||| ||||| | ||| || || | | || || |||||||| || || Sbjct 314734 ATATCGGAATGCCAAGGTTCAAGGTAGATTGCGAAGGCGCCTGGCCGTTTGTTGCCACCT 314793 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 ||||| | ||||| |||||| || ||| | || | | ||| || ||||| ||||| || Sbjct 314794 TGATCAACGTATCGAGCGGTATTGTTAAAGACACGGAGCATAGGTATAATTCCATTAGAA 314853 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220 | ||||| || || | |||||| ||| |||| || ||| | | ||||| Sbjct 314854 GAGCCATTTGTGCCTGCAATATAGGAGCCAGTGGCTCGGATACGATGGACGTTAAGACCA 314913 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 80280 || || || || | || || || | || || || | ||||| || ||||| || Sbjct 314914 ATACCACCAGCTGTCTTGGAAATCAGCGCACAAGTCTTGAGAGTATCGTAAATGCCGTCG 314973 Query 80281 ATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 80340 |||||||| || |||| | | |||||||| || |||||| | | |||||| Sbjct 314974 ATGCTATCTTCCTTCATATCGATAAGAAAACAAGAAGCCATTTGTGGCTGGGGCGTTCCC 315033 Query 80341 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTC 80400 || || || | ||| || ||||| || || || |||| | |||| | ||| || ||| Sbjct 315034 GCGTTGAAAAGGGTGGGTGAAGCATGAGTGAAAAATTTCTGGGACATCAAATTATAGGTC 315093 Query 80401 TCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGC 80460 ||||| || || |||||| | ||||||||| || || |||||||| | |||||| Sbjct 315094 TCAATGGCCTTCTCAATATCCTCTCCATGAATTCCAACTGCAACACGCATAATCATGTGT 315153 Query 80461 TGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTA 80520 || || | ||| | | ||| || ||| | || || || | || | || || Sbjct 315154 TGCGGGCGCTCAGCAACTTTGCCGTTAATTCGGAGTAAATATGACCTCTCTAGTGTCTTG 315213 Query 80521 AAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCC 80580 || |||||||| | ||| ||| || || || || | ||| ||||||| |||| || Sbjct 315214 AATCCAAAATACTGGTAGTTAAAATCACGATCATACACAATGGCCGAGTTAAGTTCCTCA 315273 Query 80581 TTATATTTGTTAACTACATCCATGGTGATACTTGAAATAAT---CGGAGAATGTTTCCCA 80637 || ||| |||| | || ||| | ||||| || || || | | || Sbjct 315274 GCATGTTTCATAACAATTTCATAGGTTTTGTGAGAAATCATGGGCGCAGGACGGTT---G 315330 Query 80638 TTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTA-AATAGtttttttGT 80696 ||||| || || ||| | | | | || || || || || | ||| | || || || Sbjct 315331 TTTTTTGGGTTGGTATAATGGTAAAGGTCGTCAATAAC-GGACGAGAATTGCTTCTTCGT 315389 Query 80697 TTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 | || || || || ||||||||||||||||| || | ||| || ||||| ||||| Sbjct 315390 CTGTTTATGCAGGTTCGATACGGCTATTCTGGCAGCAAGAATCGCGTAATCAGGATG 315446 Score = 134 bits (148), Expect = 2e-26 Identities = 704/1113 (63%), Gaps = 23/1113 (2%) Strand=Plus/Plus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| ||||| || || || || | ||||||| ||||||||||| || || || | | Sbjct 313348 GTGAACTGAATTGGCGCAGAAGCTGCCATCGTACGGAGATAGTACATGCCTGTCTTCAAA 313407 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || || ||||||| || ||||| || || | |||| | || || | Sbjct 313408 CCAAGCTTCCATCCCGCAAAGTGCATGCTAGTGATTTTGCCCATGGTAGGTTCCTTGAGG 313467 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || || || | |||||| || || ||||| || |||| || ||||||| || || Sbjct 313468 TGAATGTTGAGAGATTGGGACTGGTCAATGAATGCACCCCGATCGGCAGCCAGTTGAATA 313527 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || || |||||| || ||||| | || || || | ||||||||| | || | | Sbjct 313528 ATGGTTCTTTGTGAGATCTCCCATACTGTCTTGTAGAGAGCTTTAATATCTGCAGGGATG 313587 Query 78958 TTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 |||| | ||||| | || ||||| || || || || | || || || | || | Sbjct 313588 TTTGGAATGTTCTGGACCGAGCCACCTTCAGCGATGATACGGTTTTTCATGTTGTCTGAC 313647 Query 79015 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 79074 || | || | | | | || || |||||| || || || ||||| || Sbjct 313648 CAAAGGCCGAGATCCACGAGATCCTTCAGAAGCCACGGATTGACAACCTGGAATTCACCT 313707 Query 79075 GACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCC 79134 | | |||| | || |||||| || || |||||||| | |||| ||| ||| Sbjct 313708 GCAAGAACTCGTCTAGAGTAAATGTTTGATGTGTATGGTTCAAAACATTCGTTAAATCCG 313767 Query 79135 AAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCG 79194 | ||| ||| || || ||||||||||| || || | || ||||| | | ||| Sbjct 313768 AGAATCTGACTTGTGCTGGCTGTTGGCATAGGAGCGACAAGCAAGCTATTACGCACACC- 313826 Query 79195 TATGATCTG-ATTTTATCTTTT-AGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 ||| | || | | | | |||| || | ||||||||||||||||||| || || | Sbjct 313827 -ATGTTTTGCAATATCTGTTTTGAGCAAATCCCAATCCCAAAGATCAGTAGGCGTCACGT 313885 Query 79253 TCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAG 79312 |||| | ||||||||| | || || ||| | || || ||| || || ||||| | Sbjct 313886 TCCACATATCATATTGCAAAACGCCCTTAGAAACGGGAGAGCCTTCATAGGTCTCATAGG 313945 Query 79313 GTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGA 79372 | || || || ||||| || || ||| || || ||| |||||||||||||| Sbjct 313946 GACCGTCAACTTTGGCTAGGTCGCAGGACGCGGTCAAAGCGGCGTGATAAATGGTTTCGA 314005 Query 79373 AAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG-AATA 79431 | |||| |||| || | | ||| ||| || ||| || || ||| | || || Sbjct 314006 ATATCTGGATATTCAGCTGCTTTGCCTCTGGGGAATCGAACGG-CAATCGCAAAGCAAGG 314064 Query 79432 AACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATT 79491 || || || || | || || ||||| | |||| || | ||| | ||| || Sbjct 314065 AAAGCATCGGCAAGGCCCTGCACACCGACGGCGATTGGACGATGACGGAAGTTACTCTTT 314124 Query 79492 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATT 79551 ||||| || | ||||||| || |||| || ||||| || | ||| | || | Sbjct 314125 CGGGCTTCAGGGACGGGATAATGGTTGTTATCAATGATTTTGTTCAAATTGCGAACGAGA 314184 Query 79552 ACTTTGACCACATCCTTTAGTTTGAGAAAATCA-AATCGTCCATCTA------TTACAAA 79604 |||| || || | || ||| ||| ||| | ||| ||| | ||| | Sbjct 314185 ACTTGTGTAACCTCGTGTAACTTGCCAAAGTCATACTCG-CCACGGACGGGGTCGACATA 314243 Query 79605 CATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTG 79664 || || ||| | |||||| || || ||||| || || |||| | | || | Sbjct 314244 TGTGGGCAGCGCAAGAGATGCTAGGTTGCAAACCGCAACTTCATCTGGCGAGGTGTACTC 314303 Query 79665 TATTATTTCAGTGCAGAGGTT---ACTACACTTAATGGTTCCTAAATTTTGTTGATTACT 79721 || ||||| ||||| | ||| |||| ||| ||||| | |||| || || || Sbjct 314304 GATGATTTCCGTGCACAAGTTGGAGCTAC---GAATCGTTCCGAGGTTTTTCTGGTTGCT 314360 Query 79722 CTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTC 79781 || ||| || || ||||| || || ||||| ||| | || || || | |||| ||| Sbjct 314361 TTTGCGGTTGCATGCGTCCTTGTAGAGCATGAAGGGATTTCCGGTCTCGGTTTGAGCTTC 314420 Query 79782 TATAATCGCTTTCCAGACGACTCGAGCCTTTAT 79814 || || || | ||||| | ||||||| || Sbjct 314421 TAGGATAGCATACCAGAGTTTTTGAGCCTTAAT 314453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718241191543000