Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amauroascus_20mutatus_20[genbank_20GCA_5F001430935.1_202015-11-03] 3,075 sequences; 30,376,016 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq2726 104 2e-17 >seq2726 Length=527079 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 ||| ||||| | ||||||||| || | |||||| | || || | ||| || |||||||| Sbjct 136545 CTCTTTTTGAATATTGTAATCAGAGAGTGTACGGCCATCCTCAAGTTGCTTTCCGGCAAA 136604 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||||| || |||||||| | ||| | ||||| || || || ||| || | Sbjct 136605 AATCAAACGTTGTTGATCTGGCGGAATTCCTTCCTTATCTTGAATTTTGGTTTTTACATT 136664 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | | ||||||| | || || || | || |||||||| ||||| || |||||||| Sbjct 136665 GTCGATTGTGTCGGAGGATTCAACTTCCAATGTAATAGTTTTGCCGGTCAGGGTTTTCAC 136724 Query 43098 AAAAATTTGCAT 43109 ||||||||||| Sbjct 136725 GAAAATTTGCAT 136736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381355307578350